GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2126 |
Omentum
|
PAXgene |
1
|
2 pieces; mature adipose tissue, detached portion of fibrous tissue
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; mostly target muscularis with small portions of residual attached fat/vessels/nerve/submucosal glands
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; few pieces include ~10% attached fat
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with some dispersed residual lymphoid component, muscularis also present (not target)
|
Unacceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mature adipose tissue with 30 and 50% dense fibrocollagenous stroma with scattered ducts
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and muscularis
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2726 |
Stomach
|
PAXgene |
2
|
6 pieces; full thickness sections
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2926 |
Minor salivary glands
|
PAXgene |
1
|
1 piece; lip, stroma, and fat
|
Unacceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-3026 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; Purkinje cells are well visualized, 1 piece includes portion of meninges
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-3126 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, not the requested 4
|
Acceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-3226 |
Pituitary gland
|
PAXgene |
1
|
1 piece; adenohypophysis and neurohypophysis
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0126 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, no adherant fat.
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, trace interstitial fat
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0326 |
Prostate
|
PAXgene |
2
|
2 pieces, moderately advanced glandular mucosal autolysis, hyperplastic glandular pattern
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, minimal adherant fat; ~50% occlusive atheriosis, delineated, focally calcified
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0526 |
Testis
|
PAXgene |
1
|
2 pieces, approaching score '2'. Spermatogenesis is present but appears reduced
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 70% fibrous tissue, insufficient adipose for target GTEx tissue
|
Unacceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0726 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~45-60 microns
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0826 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponification. Islets still barely visible but degenerated.
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~40-50 microns
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1026 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular elments autolyzed; residucal viable lymphoid aggregates are ~30% tissue
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnomormalities
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.15mm, glandular mucosa totally autolyzed
|
Acceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-1326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |