GTEX-VJWN
|
51-60
|
Female
|
GTEX-VJWN-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 6x2mm; mucosa totally autolyzed; muscle in better shape;
|
Acceptable
|
|
GTEX-VJYA
|
61-70
|
Male
|
GTEX-VJYA-2026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~~7x2mm, mucosa well preserved, ~10-20 thickness
|
Acceptable
|
|
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~9x1.5mm. Mucosa reasonably well preserved, ~15-20% of thickness
|
Acceptable
|
|
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~6x5mm. Muscosa <~ 10% of thickness
|
Acceptable
|
|
GTEX-W5X1
|
41-50
|
Female
|
GTEX-W5X1-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 9.5x2mm; autolysis ranges from moderate to severe
|
Acceptable
|
|
GTEX-WEY5
|
41-50
|
Female
|
GTEX-WEY5-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 10x3mm; mucosa moderately autolyzed; muscle slightly autolyzed
|
Acceptable
|
|
GTEX-WFG7
|
21-40
|
Male
|
GTEX-WFG7-1526 |
Colon, transverse
|
PAXgene |
1
|
8 pieces ~10x1mm, Mucosa moderate well preserved, ~20-25% of thickness; some areas starting to degrade to autolysis score2
|
Acceptable
|
|
GTEX-WFG8
|
21-40
|
Male
|
GTEX-WFG8-1526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~9x2mm. Mucosa partly sloughed, not well preserved
|
Acceptable
|
|
GTEX-WFJO
|
21-40
|
Male
|
GTEX-WFJO-1626 |
Colon, transverse
|
PAXgene |
1
|
7 pieces, up to 10x4.5mm; all have full thickness of wall
|
Acceptable
|
|
GTEX-WFON
|
41-50
|
Male
|
GTEX-WFON-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~10x3mm. Mucosa variably but moderately preserved, ~10-15% of thickness
|
Acceptable
|
|
GTEX-WH7G
|
41-50
|
Male
|
GTEX-WH7G-1326 |
Colon, transverse
|
PAXgene |
1
|
5 pieces, up to 5x3mm; Mostly submucosa, variable amounts of mucosa and muscularis propria
|
Acceptable
|
|
GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 10x4mm; Good mucosal preservation.
|
Acceptable
|
|
GTEX-WHSB
|
41-50
|
Male
|
GTEX-WHSB-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~6x2.5mm, 10% mucosa, relatively well preserved
|
Acceptable
|
|
GTEX-WHSE
|
Other
|
Male
|
GTEX-WHSE-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~6x2.5mm. Mucosa sloughed or badly autolyzed
|
Acceptable
|
|
GTEX-WHWD
|
51-60
|
Male
|
GTEX-WHWD-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 5.5x2mm; 1 of 6 has muscularis only, other 5 have full thickness
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~7x2mm, mucosa near totally sloughed, badly autolyzed
|
Acceptable
|
|
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x2mm; mucosa = 3; muscularis = 2 (autolysis)
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~6x3mm. Mucosa badly autolyzed
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x1.5mm; mucosa = 3, muscle =2 (autolysis).
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-2026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~7x4mm, mucosa is ~10% of thickness, well preserved
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~7x4mm, mucosa moderately autoyzed, 10-20% of thickness
|
Acceptable
|
|
GTEX-WRHK
|
21-40
|
Female
|
GTEX-WRHK-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 10x2mm; 2 with no muscle, 2 with focal muscle
|
Acceptable
|
|
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~8x2.5mm, mucosa moderately-badly autolyzed, ~10-20% thickness
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 8x2mm; autolyzed mucosa (3); muscle moderately autolyzed (2)
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~7x1mm @0-30% badly autolzyed mucosa
|
Acceptable
|
|