GTEx Histological Images
Displaying 25 of 1198 results.
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| Case ID | Age | Gender | Specimen ID | Tissue Type | Fixative | Autolysis | Pathology Review Comments | Acceptability | Action |
| GTEX-1S5ZU | 21-40 | Female | GTEX-1S5ZU-2726 | Uterus | PAXgene | 1 | 2 pieces; myometrium only, no endometrium [in these cuts] | Acceptable |  |
| GTEX-1S82U | 21-40 | Female | GTEX-1S82U-0726 | Colon, transverse | PAXgene | 1 | 6 pieces, target mucosa well preserved, up to ~0.5mm, ~10% of thickness in 4/6 sections | Acceptable | |
| GTEX-N7MS | 61-70 | Male | GTEX-N7MS-1926 | Stomach | PAXgene | 3 | extensive autolysis in mucosa | Acceptable | |
| GTEX-N7MS | 61-70 | Male | GTEX-N7MS-2025 | Colon, transverse | PAXgene | 3 | extensive autolysis in mucosa | Acceptable | |
| GTEX-N7MS | 61-70 | Male | GTEX-N7MS-2226 | Prostate | PAXgene | 3 | extensive autolysis in glands | Acceptable | |
| GTEX-NPJ7 | 61-70 | Female | GTEX-NPJ7-1126 | Thyroid gland | PAXgene | 1 | 3.7x4.5mm colloid nodule in 12 x12mm specimen. Mild autolysis (“score 1”) | Acceptable | |
| GTEX-NPJ7 | 61-70 | Female | GTEX-NPJ7-1326 | Coronary artery | PAXgene | 1 | One of 2 arteries is 2.5mm in diameter in 9 x 2.6mm fatty specimen | Acceptable | |
| GTEX-O5YT | 21-40 | Male | GTEX-O5YT-1426 | Colon, transverse | PAXgene | 1 | sloughed mucosa in 1 of 3 pieces | Acceptable | |
| GTEX-O5YV | 61-70 | Female | GTEX-O5YV-2226 | Vagina | PAXgene | 0 | 0; epithelium varies in quantity | Acceptable | |
| GTEX-OHPK | 51-60 | Female | GTEX-OHPK-0726 | Esophagus - mucosa | PAXgene | 1 | there is hardly any mucosa in this section, only muscularis. 625 and 725 have been switched and should be relabeled. 625 is muscularis propria. 725 is mucosa (the muscle present is muscularis mucosae). Inform BSS and LDACC of switch. | Acceptable | |
| GTEX-OHPL | 61-70 | Female | GTEX-OHPL-1626 | Muscle, skeletal | PAXgene | 1 | Mislabeled ovary in Aperio; slide number correct in Aperio | Acceptable | |
| GTEX-OHPL | 61-70 | Female | GTEX-OHPL-2126 | Cervix - ectocervix | PAXgene | 2 | High grade dysplasia in one piece with epithelium, partly sloughed | Acceptable | |
| GTEX-OHPM | 51-60 | Male | GTEX-OHPM-1526 | Stomach | PAXgene | 1 | 1, in some areas 0. Extremely well-preserved mucosa—25-30% of specimen thickness | Acceptable | |
| GTEX-OHPN | 61-70 | Female | GTEX-OHPN-2526 | Brain - cortex | PAXgene | 1 | Fragment of meninges present in block | Acceptable | |
| GTEX-OIZF | 61-70 | Male | GTEX-OIZF-1026 | Pancreas | PAXgene | 1 | Well preserved pancreas with about 40% fat in aliquot | Acceptable | |
| GTEX-OIZG | 51-60 | Male | GTEX-OIZG-0626 | Coronary artery | PAXgene | 0 | About 40% fat in aliquot. 30% intimal sclerosis | Acceptable | |
| GTEX-OIZG | 51-60 | Male | GTEX-OIZG-1026 | Esophagus - mucosa | PAXgene | 0 | 3 pieces up to 8x2 mm. Squamous hyperplasia. Large submucosal glands in one piece | Acceptable | |
| GTEX-OIZH | 51-60 | Male | GTEX-OIZH-0326 | Heart | PAXgene | 1 | Patchy ischemic changes. A number of central tears in specimen. 11x 6mm | Acceptable | |
| GTEX-OIZI | 41-50 | Male | GTEX-OIZI-0426 | Nerve - tibial | PAXgene | 1 | No fat in aliquot. 5x2.6mm | Acceptable | |
| GTEX-OOBJ | 61-70 | Male | GTEX-OOBJ-1526 | Stomach | PAXgene | 1 | Extremely well preserved. 1 of 4 pieces with little-no mucosa, which averages .8mm thickness in 3 pieces—two of which are 30-50%mucosa in thickness. Focal adipose areas underfixed. | Acceptable | |
| GTEX-OOBJ | 61-70 | Male | GTEX-OOBJ-2626 | Thyroid gland | PAXgene | 1 | Possible 0.4 x 0.6mm occult papillary ca, pending slide review. Patchy areas of peripheral adipose tissue are poorly fixed, tears and holes in section. | Acceptable | |
| GTEX-OXRK | 51-60 | Female | GTEX-OXRK-1726 | Colon, transverse | PAXgene | 1 | Well preserved. Abundant mucosa in 2 pieces; sparse mucosa in 1 | Acceptable | |
| GTEX-OXRL | 51-60 | Male | GTEX-OXRL-3026 | Coronary artery | PAXgene | 1 | Small artery, 2.6 x 1mm, with large eccentric plaque in 6.8x3.8mm adipose tissue containing small nerve. Artery is 10% of aliquot. Also separate 2.7x2.6mm fat tissue with very small 0.4x0.2 vessel. | Acceptable | |
| GTEX-OXRN | 51-60 | Male | GTEX-OXRN-0126 | Skin, leg | PAXgene | 1 | Hollow defects in dermal fat. | Acceptable | |
| GTEX-OXRN | 51-60 | Male | GTEX-OXRN-0626 | Liver | PAXgene | 1 | Centrilobular ischemia and congestion 9x8.3mm. Capsule present in aliquot | Acceptable | |