GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1026 |
Pancreas
|
PAXgene |
1
|
11.2x8.3mm. Well preserved, less than 5% fat.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1426 |
Colon, transverse
|
PAXgene |
2
|
Much of specimen also poorly fixed (adipose portions—separation and fragmenting of sections. Mucosal thickness averages 150-200 microns, ~ 10% specimen thicknesss
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1526 |
Stomach
|
PAXgene |
1
|
Extremely well preserved. 1 of 4 pieces with little-no mucosa, which averages .8mm thickness in 3 pieces—two of which are 30-50%mucosa in thickness. Focal adipose areas underfixed.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1626 |
Muscle, skeletal
|
PAXgene |
0
|
17 x 9mm specimen, minimal fat.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1726 |
Nerve - tibial
|
PAXgene |
1
|
5 x 4.2 mm specimen, 30% intermingled adipose tissue. Center of one aliquot is poorly fixed (adipose).
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1826 |
Artery - tibial
|
PAXgene |
1
|
4.4 x 6.8 mm specimen.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1926 |
Urinary bladder
|
PAXgene |
1
|
Two of five sections poorly fixed/extreme separation. Mucosa sub-totally sloughed/degraded, about 31 microns thick where present
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2026 |
Prostate
|
PAXgene |
1
|
13 x 9.7mm. Remarkably well preserved. Patchy glandular (papillary) hyperplasia, focal chronic prostatitis
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2126 |
Testis
|
PAXgene |
1
|
12 x 8.8mm. Good spermatogenesis evident
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-2626 |
Thyroid gland
|
PAXgene |
1
|
Possible 0.4 x 0.6mm occult papillary ca, pending slide review. Patchy areas of peripheral adipose tissue are poorly fixed, tears and holes in section.
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-3026 |
Coronary artery
|
PAXgene |
1
|
4.8 x 5.1mm specimen. ~20 circumferential atherosclerotic narrowing
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0126 |
Skin, leg
|
PAXgene |
1
|
3 pieces 9.5x1.8mm. Epidermis 30um
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0226 |
Adipose tissue
|
PAXgene |
2
|
Large 16x12.8 aliquot. Most appears empty with central unfixed spaces
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0326 |
Lung
|
PAXgene |
1
|
Alveolar exudates. 10x10mm
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0426 |
Esophagus - mucosa
|
PAXgene |
2
|
3 pieces 5.6x1.2mm. No
epithelium; wall autolyzed
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0526 |
Esophagus - muscularis
|
PAXgene |
2
|
3 pieces: 8.4x3.8mm. 1 with two large nerves.
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0626 |
Spleen
|
PAXgene |
2
|
10x7.5mm. Cassette grid marks
present.
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0726 |
Colon, transverse
|
PAXgene |
3
|
Mucosa, 1 wall. Three pieces:
9.5x1.9mm. Moderate fracture
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0826 |
Adrenal glands
|
PAXgene |
2
|
Two pieces: 26x5mm, 10x3mm.
40% fat
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0926 |
Ovary
|
PAXgene |
2
|
Atrophic. 9.5x11mm.
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-1026 |
Fallopian tube
|
PAXgene |
3
|
Epithelium, 1 wall. 2 pieces:
3x4.4mm
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-1126 |
Urinary bladder
|
PAXgene |
3
|
Epithelium, 1. Wall. Three pieces.
Moderate congestion. 4x7.3mm
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-1226 |
Thyroid gland
|
PAXgene |
2
|
12x12mm. Moderate fractures.
Foci of microadenosis
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-1326 |
Brain - cortex
|
PAXgene |
1
|
Two pieces: 5x6.5mm. Slight fractures
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-1426 |
Brain - cerebellum
|
PAXgene |
0
|
Two pieces: 6.4x7mm. Slight fractures
|
Acceptable
|
|