GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces. 14x9 & 10x10mm
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0726 |
Lung
|
PAXgene |
1
|
2 pieces. 11x8 & 9x7mm; Patchy alveolar hemorrhage.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0826 |
Omentum
|
PAXgene |
1
|
2 pieces, 15x9 & 12x9mm: Central hollow defects in both pieces.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-0926 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces. up to 14x3mm; Well dissected, largely free of subcutaneous adipose.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces. up to 9.5x4mm; Well dissected.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces. up to 11.5x7mm; Up to 2mm of periesophageal extraneous fibrous stroma
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces. up to 12x6mm; Most well dissected; some periesophageal stroma.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1326 |
Stomach
|
PAXgene |
2
|
6 pieces. up to 8x3mm; Mucosa and submucosa only.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces. up to 9x4mm; Well dissected: muscle mainly; no mucosa.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces. up to 12x3mm; Only 1 of 6 has muscularis. Transverse colon sample should have full thickness of wall.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1626 |
Ileum
|
PAXgene |
2
|
6 pieces. up to 7x2mm; 1 small lymphoid nodule in each of 3 pieces. Dissection good: no muscularis. 3 are mainly submucosa.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces. 16x9 & 14x6mm; Ducts and lobules present. Larger piece good; smaller is mainly adipose.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1826 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces. 11x9 & 12x11mm; 30% glands in 1, 10% in other; both good (marked). Too much surface epithelium and fibrous stroma
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1926 |
Skin, leg
|
PAXgene |
1
|
6 pieces. up to 10x3.5mm; 5 of 6 have well trimmed deep aspect.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2026 |
Adipose tissue
|
PAXgene |
1
|
2 pieces. 12x9.5 & 12.5x11mm;
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces. 19x12 & 16.5x15mm; specimen sequenced and fingerprint confirmed as match to other donor specimens
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2226 |
Nerve - tibial
|
PAXgene |
1
|
4 pieces. up to 6x4mm; Well dissected.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-2326 |
Artery - tibial
|
PAXgene |
0
|
2 pieces. 4x3 & 5x4mm; Well dissected.
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, up to 12.5x4mm; squamous epitheium is ~2% thickness
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0226 |
Omentum
|
PAXgene |
1
|
2 pieces, 20x13 & 18x12mm;
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 11x10 & 12.5x9mm; multiple small (1-2mm) colloid cysts
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 10x3mm; ~0.2mm layer discontinuous atherosis
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 3x2 & 3x2mm; subtotally occlusive, calcifying atherosclerosis. One aliquot has ~1mm adherent fatty nubbin, delineated
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0626 |
Heart
|
PAXgene |
1
|
2 pieces, 13x8 & 15x12mm; remarkably minimal interstitial fibrosis given degree of atherosclerosis of coronary artery
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-0726 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 10x7 & 6x5mm;
|
Acceptable
|
|