GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 6x4.5mm; all muscularis, good specimens
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1226 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 8x6mm; well preserved. Marked chronic active gastritis with patchy intestinal metaplasia, gastropathic changes with foveolar hyperplasia, features suggest possible H pylori infection
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1326 |
Omentum
|
PAXgene |
1
|
2 pieces, 14x7 & 13.5x11mm;
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1426 |
Ileum
|
PAXgene |
1
|
6 pieces, 7.5x4mm; well prserved, ~40% lymphoid elements, rep. areas delineated. Superb specimen
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 9.5x4mm; mucosa well preserved, mucosa ~5-10% thickness
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x4mm; generally all muscularis, a few have adherent fatty nubbins up to ~3mm thick, delineated
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1726 |
Ovary
|
PAXgene |
1
|
2 pieces, 9x7 & 13x8mm; typical post menopausal appearance
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1826 |
Uterus
|
PAXgene |
1
|
2 pieces, 11.5x5 & 8x6mm; cystic atrophy/weakly proliferative endometrium, up to ~2mm thick, delineated
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1926 |
Vagina
|
PAXgene |
1
|
6 pieces, up to 5x4mm; mucosa is sloughed on all pieces
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 12x11 & 13x12mm; atrophic TDLUs in one, delineated
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, up to 7x3.5mm; squamous epithelium is ~2.5% thickness
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2226 |
Minor salivary glands
|
PAXgene |
0
|
2 pieces, 4x4 & 4x4mm; all fat/skeletal muscle, no glandular elements.
|
Unacceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 11x7.5 & 9.5x8mm;
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2426 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 9x3.5mm; squamous epithelium is ~3% ofthickness
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 10x7 & 11x10mm; less than 2% interstitial fat, good specimens
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 5x4.5 & 5x4mm; minute adherent nubbins of fat on both, ~0.5mm
|
Acceptable
|
 |
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-2726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, 6x4.5 & 7x5mm; 1mm adherent fibrous &/or peripher al nerve on both
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0126 |
Spleen
|
PAXgene |
2
|
2 pieces, 11x11 & 11x10mm;
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0226 |
Adrenal glands
|
PAXgene |
1
|
3 pieces, up to 10x6mm;
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0326 |
Liver
|
PAXgene |
1
|
2 pieces, 11x10 & 10x9mm. Moderate portal lymphoid infiltrates consistent with chronic hepatitis or chronic biliary tract disease. No steatosis.
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0426 |
Pancreas
|
PAXgene |
1
|
2 pieces, 11x10 & 11x9mm. 30% internal and external adipose.
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 15x9 & 10x9mm. Multinodular goitre with regressive changes (fibrous bands).
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0626 |
Lung
|
PAXgene |
1
|
2 pieces, 10x8 & 10x8mm. Panacinar emphysema. Carbon deposits.
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0726 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 11x3mm. Well trimmed. No plaques.
|
Acceptable
|
 |
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-0826 |
Heart
|
PAXgene |
1
|
2 pieces, 11x8 & 10x8mm. 2x3 mm artifactual defect in 1 piece.
|
Acceptable
|
 |