GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 7x5mm; 2 with 1mm extraneous stroma.
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 7x3mm; well dissected; surface sloughing, severe in 1 piece
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 9x5mm; well trimmed musc. propria; good ganglion cells
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1626 |
Spleen
|
PAXgene |
1
|
2 pieces, 8x7 & 9x8mm; mild congestion
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1726 |
Pancreas
|
PAXgene |
1
|
2 pieces, 9x8.5 & 9x6mm; well trimmed, no adipose
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x4mm. Well trimmed muscularis except for up to 1 mm submucosa in all.
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 9x4mm. Well trimmed full thickness specimen. Slight surface sloughing.
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-2026 |
Omentum
|
PAXgene |
1
|
2 pieces, 9x7 & 9x8mm;. No fixation artifacts
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-2126 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 8x6mm. 3 pieces with well preserved gastric mucosa and muscle. 3 pieces with squamous and mixed squamous and gastric mucosa without muscularis propria (annotated on image-see issues)
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-2226 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 7x6mm. Well preserved ileal mucosa without lymphoid tissue
|
Unacceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 12x6.5 & 9x9mm. Ducts and lobules with apocrine change in 1 piece. Fibrocystic change. 90% adipose in other piece.
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 17x11.5 & 14.5x10mm; no significant inflammation noted
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, 14x5 & 17x7mm; patchy hemorrhagic infarction, all cortex, infarcted areas delineated
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 12x4mm; all muscularis; good specimens
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 13x3mm; squamous mucosa well-preserved, ~25% thickness
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 14x6mm; all muscuarlis; good specimens
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0626 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 13x2mm;
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0726 |
Stomach
|
PAXgene |
1
|
6 pieces, up to 8.5x4mm; mucosa remarkably well-preserved, 20-30% thickness
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, up to 13x4mm; squamous epithelium is ~2% thickness
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-0926 |
Uterus
|
PAXgene |
1
|
2 pieces, 11x10 & 16.5x10.5mm; foci of proliferative endometrium ~0.5mm thick, delineated
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-1026 |
Ovary
|
PAXgene |
1
|
2 pieces, 17x13mm & 17x10mm; multiple follicular/simple cysts
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-1126 |
Omentum
|
PAXgene |
1
|
2 pieces, 9x5 & 12x7mm;
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-1226 |
Vagina
|
PAXgene |
1
|
6 pieces, up to 13x3mm; glandular metaplasia noted
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, up to 8x2mm; mucosa well preserved ~20% thickness
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-1426 |
Ileum
|
PAXgene |
1
|
6 pieces, up to 7.5x3mm; well preserved mucosa, lymphoid follicles present ~5% total tissue, rep ones delineated
|
Acceptable
|
|