GTEX-ZLWG
|
51-60
|
Female
|
GTEX-ZLWG-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, predominantly mucosa and submucosa with small foci of muscularis. Numerous lymphoid aggregates.
|
Acceptable
|
|
GTEX-ZP4G
|
21-40
|
Female
|
GTEX-ZP4G-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, abundant lymphoid aggregates, ~15-20% tissue present, well preserved.
|
Acceptable
|
|
GTEX-ZPCL
|
61-70
|
Female
|
GTEX-ZPCL-1726 |
Ileum
|
PAXgene |
1
|
6 pieces. 3 have good lymphoid tissue (marked), BUT all have full thickness muscle as well rather than mucosa only. The muscle makes up over 50% of the pieces. Will be difficult to get lymphoid data.
|
Acceptable
|
|
GTEX-ZPIC
|
41-50
|
Female
|
GTEX-ZPIC-2326 |
Ileum
|
PAXgene |
2
|
4 pieces, ~10% mucosa, lymphoid elements, not follicles, not well preserved
|
Acceptable
|
|
GTEX-ZPU1
|
41-50
|
Male
|
GTEX-ZPU1-1826 |
Ileum
|
PAXgene |
1
|
6 pieces, two with abundant mucosal lymphoid tissue , other with ileocecal mucosa with focal lymphoid aggregates, all also have abundant muscularis (not target)
|
Acceptable
|
|
GTEX-ZQG8
|
61-70
|
Female
|
GTEX-ZQG8-2526 |
Ileum
|
PAXgene |
1
|
6 pieces. Very small foci of mucosal ileocecal lymphoid tissue in 2 pieces (marked). All pieces have large amounts of muscle; 4 have only muscle
|
Acceptable
|
|
GTEX-ZQUD
|
21-40
|
Male
|
GTEX-ZQUD-0926 |
Ileum
|
PAXgene |
1
|
5 pieces, lymphoid aggregates well-sampled, ~20-25% total
|
Acceptable
|
|
GTEX-ZT9W
|
51-60
|
Male
|
GTEX-ZT9W-1926 |
Ileum
|
PAXgene |
1
|
6 pieces. Several mucosal lymphoid deposits [marked]. Muscularis propria makes up 80% of pieces. It should be dissected off the ileal aliquots.
|
Acceptable
|
|
GTEX-ZT9X
|
41-50
|
Male
|
GTEX-ZT9X-1026 |
Ileum
|
PAXgene |
1
|
4 pieces, nearly pure mucosa; lymphoid elements are ~20% of tissue, only rare aggregates (delineated)
|
Acceptable
|
|
GTEX-ZTPG
|
21-40
|
Female
|
GTEX-ZTPG-2626 |
Ileum
|
PAXgene |
1
|
6 pieces, clusters of lymphoid tissue (marked), muscularis propria present in all 6 pieces
|
Acceptable
|
|
GTEX-ZTSS
|
41-50
|
Male
|
GTEX-ZTSS-0926 |
Ileum
|
PAXgene |
1
|
6 pieces: 5 with abundant lymphoid tissues [marked]; well dissected mucosa and submucosa
|
Acceptable
|
|
GTEX-ZTTD
|
41-50
|
Male
|
GTEX-ZTTD-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, lymphoid elements are ~30-40% of tissue which is badly autolyzed, Rep. lymphoid aggregated delineated
|
Acceptable
|
|
GTEX-ZTX8
|
21-40
|
Male
|
GTEX-ZTX8-0526 |
Ileum
|
PAXgene |
1
|
6 pieces, well trimmed, prominent lymphoid component
|
Acceptable
|
|
GTEX-ZU9S
|
21-40
|
Male
|
GTEX-ZU9S-2326 |
Ileum
|
PAXgene |
3
|
4 pieces: no lymphoid tissue, no mucosa
|
Unacceptable
|
|
GTEX-ZUA1
|
41-50
|
Male
|
GTEX-ZUA1-2526 |
Ileum
|
PAXgene |
2
|
5 pieces. Scattered collections of lymphoid tissue [annotated] in autolyzed mucosa.
|
Acceptable
|
|
GTEX-ZV68
|
51-60
|
Female
|
GTEX-ZV68-2126 |
Ileum
|
PAXgene |
3
|
5 pieces, mucosa totally sloughed, residual lymphoid aggregates are ~15% total tissue (delineated)
|
Acceptable
|
|
GTEX-ZV6S
|
41-50
|
Female
|
GTEX-ZV6S-1026 |
Ileum
|
PAXgene |
2
|
5 pieces, predominantly submucosa and strips of colonic mucosa
|
Unacceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1426 |
Ileum
|
PAXgene |
1
|
3 pieces, excellent specimen; well preserved with Peyer patches ~50% of specimen, rep areas delineated
|
Acceptable
|
|
GTEX-ZVE1
|
51-60
|
Female
|
GTEX-ZVE1-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, fragments of autolyzed mucosa and strips of fat and muscularis, limited lymphoid tissue
|
Unacceptable
|
|
GTEX-ZVE2
|
51-60
|
Male
|
GTEX-ZVE2-2326 |
Ileum
|
PAXgene |
2
|
5 pieces, no lymphoid tissue
|
Unacceptable
|
|
GTEX-ZVP2
|
51-60
|
Male
|
GTEX-ZVP2-1726 |
Ileum
|
PAXgene |
1
|
3 pieces, mucosa and submucosa, prominent lymphoid component
|
Acceptable
|
|
GTEX-ZVT2
|
51-60
|
Female
|
GTEX-ZVT2-2126 |
Ileum
|
PAXgene |
1
|
3 pieces; all with abundant lymphoid tissue in mucosa
|
Acceptable
|
|
GTEX-ZVT3
|
61-70
|
Female
|
GTEX-ZVT3-2526 |
Ileum
|
PAXgene |
3
|
4 pieces, ~10% lymphoid/Peyer's aggregates, but badly autolyzed
|
Acceptable
|
|
GTEX-ZVT4
|
51-60
|
Female
|
GTEX-ZVT4-2026 |
Ileum
|
PAXgene |
3
|
4 pieces, fragmented. Lymphoid elements ~20-30% total tissue but all badly autolyzed
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue in 5 of 6 pieces
|
Acceptable
|
|