GTEX-1GF9W
|
61-70
|
Male
|
GTEX-1GF9W-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; predominantly muscularis and submucosa with small fragment of autolyzed mucosa (arrow)
|
Unacceptable
|
|
GTEX-1GF9W
|
61-70
|
Male
|
GTEX-1GF9W-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; full thickness colon (target is muscularis only)
|
Unacceptable
|
|
GTEX-1GF9X
|
41-50
|
Female
|
GTEX-1GF9X-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous & glandular mucosa with intestinal metaplasia (Barrett esophagus) no dysplasia
|
Unacceptable
|
|
GTEX-1GF9X
|
41-50
|
Female
|
GTEX-1GF9X-0826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; all contain gastric mucosa and muscle
|
Unacceptable
|
|
GTEX-1GF9X
|
41-50
|
Female
|
GTEX-1GF9X-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; well dissected but only 1 lymphoid nodule; LCM
|
Unacceptable
|
|
GTEX-1GF9X
|
41-50
|
Female
|
GTEX-1GF9X-2226 |
Uterus
|
PAXgene |
1
|
2 pieces; not uterus; looks like bladder and fat tissue
|
Unacceptable
|
|
GTEX-1GL5R
|
51-60
|
Male
|
GTEX-1GL5R-2326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; adipose tissue, not skeletal muscle
|
Unacceptable
|
|
GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-0426 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; spleen, not adrenal
|
Unacceptable
|
|
GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-0526 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; severe arterial, arteriolar and glomerular sclerosis with hyalin casts; 'end-stage' kidney
|
Unacceptable
|
|
GTEX-1GMR2
|
51-60
|
Male
|
GTEX-1GMR2-0926 |
Stomach
|
PAXgene |
1
|
6 pieces; edematous muscularis without mucosa
|
Unacceptable
|
|
GTEX-1GMR8
|
51-60
|
Female
|
GTEX-1GMR8-1526 |
Liver
|
PAXgene |
2
|
2 pieces; nodular cirrhosis; transplant 2011; hemochromatosis per history
|
Unacceptable
|
|
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, not cerebellum, not obvious switch
|
Unacceptable
|
|
GTEX-1GN1U
|
51-60
|
Female
|
GTEX-1GN1U-2826 |
Ileum
|
PAXgene |
2
|
4 pieces, no target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; some sclerotic glomeruli and vascular thickening, 3 are medulla (not target)
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-1926 |
Prostate
|
PAXgene |
2
|
2 pieces; seminal vesicle, not prostate
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2226 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; mucosa denuded
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; entirely autolyzed mucosa and muscularis
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2426 |
Ileum
|
PAXgene |
3
|
5 pieces; autolyzed, also includes muscularis (not target)
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness, autolyzed
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2626 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; autolyzed muscularis
|
Unacceptable
|
|
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; muscularis only, no mucosa
|
Unacceptable
|
|
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-1826 |
Ileum
|
PAXgene |
3
|
5 pieces; excessive autolysis of lymphoid tissue; muscularis propria in 4 of 5 pieces
|
Unacceptable
|
|
GTEX-1GN73
|
61-70
|
Male
|
GTEX-1GN73-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; mucosa sampled rather than muscularis propria
|
Unacceptable
|
|
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1126 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; submucosa
|
Unacceptable
|
|
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; predominantly submucosa
|
Unacceptable
|
|