GTEX-12ZZX
|
41-50
|
Female
|
GTEX-12ZZX-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis
|
Acceptable
|
 |
GTEX-12ZZY
|
61-70
|
Male
|
GTEX-12ZZY-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis, trace adherent fat
|
Acceptable
|
 |
GTEX-12ZZZ
|
61-70
|
Male
|
GTEX-12ZZZ-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscle, virtually free of fat
|
Acceptable
|
 |
GTEX-13111
|
51-60
|
Male
|
GTEX-13111-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well trimmed muscle
|
Acceptable
|
 |
GTEX-13112
|
51-60
|
Male
|
GTEX-13112-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; submucosal fat on 5 of 6 pieces measuring up to 1 mm thick; autolyzed mucosal remnant annotated
|
Acceptable
|
 |
GTEX-13113
|
61-70
|
Female
|
GTEX-13113-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~90% muscularis; 'contaminant mucosa up to ~10%
|
Acceptable
|
 |
GTEX-1313W
|
51-60
|
Female
|
GTEX-1313W-2426 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, predominantly well trimmed with scant residual mucosa (marked)
|
Acceptable
|
 |
GTEX-131XE
|
41-50
|
Male
|
GTEX-131XE-1026 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces; well dissected muscularis (target)
|
Acceptable
|
 |
GTEX-131XF
|
51-60
|
Male
|
GTEX-131XF-1526 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces; mucosa only; (this could be transverse colon)
|
Unacceptable
|
 |
GTEX-131XG
|
51-60
|
Female
|
GTEX-131XG-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis, trace 'contaminant' mucosa, delineated
|
Acceptable
|
 |
GTEX-131XH
|
51-60
|
Male
|
GTEX-131XH-1926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, >50% mucosa, incorrect target for sigmoid colon for GTEx purposes
|
Unacceptable
|
 |
GTEX-131XW
|
51-60
|
Female
|
GTEX-131XW-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
GTEX-131YS
|
61-70
|
Female
|
GTEX-131YS-2926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well trimmed
|
Acceptable
|
 |
GTEX-132AR
|
51-60
|
Female
|
GTEX-132AR-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 have extraneous fat
|
Acceptable
|
 |
GTEX-132NY
|
51-60
|
Male
|
GTEX-132NY-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces all musculars
|
Acceptable
|
 |
GTEX-132Q8
|
61-70
|
Male
|
GTEX-132Q8-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; several pieces include residual autolyzed mucosa (not target)
|
Unacceptable
|
 |
GTEX-132QS
|
61-70
|
Male
|
GTEX-132QS-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis
|
Acceptable
|
 |
GTEX-1339X
|
41-50
|
Male
|
GTEX-1339X-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; complete muscularis but with up to 1.6 mm thick fibrous submucosa
|
Acceptable
|
 |
GTEX-133LE
|
21-40
|
Female
|
GTEX-133LE-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 2 small mucosal foci delineated (not target)
|
Acceptable
|
 |
GTEX-1399Q
|
41-50
|
Male
|
GTEX-1399Q-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; minimal residual attached autolyzed mocosa
|
Acceptable
|
 |
GTEX-1399R
|
21-40
|
Male
|
GTEX-1399R-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 4 contain mucosa (NOT target); all contain muscularis
|
Acceptable
|
 |
GTEX-1399S
|
21-40
|
Female
|
GTEX-1399S-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis, good specimens
|
Acceptable
|
 |
GTEX-1399T
|
61-70
|
Male
|
GTEX-1399T-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces (fragmented); predominantly muscularis with few strips of residual autolyzed mucosa; 2 pieces with ~10% attached fat
|
Acceptable
|
 |
GTEX-1399U
|
41-50
|
Female
|
GTEX-1399U-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, adherent fat/serosa on several sections up to ~0.7mm, rep delineated
|
Acceptable
|
 |
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-2926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 10% to 30% submucosal fat present
|
Acceptable
|
 |