GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; interstitial fibrosis and variably sized micro nodules; focal calcification (outlined)
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mature adipose tissue with fibrovascular component; no evidence of ductal structures
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-0926 |
Lung
|
PAXgene |
2
|
2 pieces; pleura included (arrows); thick walled vessels; thick alveolar walls; hemosiderin laden histiocytes
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1026 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; atherosclerotic plaque and medial calcification narrowing the lumen by ~50%; attached adventitia and fat, ~50% of tissue (outlined)
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1226 |
Aorta
|
PAXgene |
1
|
6 pieces; up to 1mm thick atherosclerotic plaque (arrows)
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1326 |
Heart
|
PAXgene |
1
|
2 pieces; interstitial fibrosis
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1426 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue with fibrovascular component
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1526 |
Spleen
|
PAXgene |
1
|
2 pieces; thick capsule included (arrows); congestion
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1626 |
Liver
|
PAXgene |
2
|
3 pieces; capsule included (arrows); advanced cirrhosis
|
Unacceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1726 |
Stomach
|
PAXgene |
2
|
6 pieces; moderate to severe autolysis of mucosa and preserved muscularis
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-1926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; stratified squamous epithelium ~0.5mm thick; submucosal glands (outlined)
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2026 |
Pancreas
|
PAXgene |
2
|
2 pieces; some moderate but mostly severe parenchymal autolysis; 50% internal/external fat (outlined) and wide fibrous band (arrows)
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderate to severe mucosal autolysis and preserved muscularis
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, preserved muscularis and residual target lymphoid aggregates
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis and thin rim of serosa with fat
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2526 |
Testis
|
PAXgene |
1
|
2 pieces; thick tubular basement membrane; interstitial fibrosis; lack of spermatogenesis and increase of Sertolli cells;
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2626 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma and glandular component with sloughed epithelial cells; amylaceous bodies
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; renal cortex not present; cirrhotic liver
|
Unacceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2826 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; essentially well trimmed skin with focal internal fat (outlined); ~45 micron thick epidermis
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece; 20% neurohypophysis and 80% adenohypophysis
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-3026 |
Brain - cerebellum
|
PAXgene |
1
|
5 pieces; mild to moderate autolysis; focus of attached meninges (arrow); Purkinje cells present
|
Acceptable
|
|
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-3126 |
Brain - cortex
|
PAXgene |
1
|
4 fragmented pieces; mild to moderate autolysis; attached small fragments of meninges outlined
|
Acceptable
|
|