GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~7x2.5mm. Mucosa reasonably well-preserved, ~25-30% of thickness
|
Acceptable
|
 |
GTEX-RVPU
|
51-60
|
Male
|
GTEX-RVPU-1626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~6.5x1.5mm. Mucosa severely autolyzed
|
Acceptable
|
 |
GTEX-RVPV
|
61-70
|
Male
|
GTEX-RVPV-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2.5 mm; mucosa severely autolyzed; muscle slight autolysis
|
Acceptable
|
 |
GTEX-RWS6
|
61-70
|
Female
|
GTEX-RWS6-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 9x5 mm; 3 pieces have mucosa, 3 (thicker) others are all muscle
|
Acceptable
|
 |
GTEX-RWSA
|
41-50
|
Male
|
GTEX-RWSA-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~7.5x1.5mm. Mucosa badly autolyzed, 10-20% of thickness
|
Acceptable
|
 |
GTEX-S33H
|
21-40
|
Male
|
GTEX-S33H-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces up to 9x2 mm; mucosa on all (but autolyzed); muscularis varies in extent; submucosa heavily adiposed
|
Acceptable
|
 |
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~7x3.5mm. Mucosa reasonably well preserved, ~8-10% of thickness
|
Acceptable
|
 |
GTEX-S3LF
|
61-70
|
Male
|
GTEX-S3LF-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~6x2mm. Mucosa ~ 20-30% of thickness, epithelial components totally autolyzed, partially sloughed
|
Acceptable
|
 |
GTEX-S3XE
|
51-60
|
Male
|
GTEX-S3XE-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 11x4 mm; each has well preserved mucosa and all layers intact
|
Acceptable
|
 |
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 7x4 mm; surface sloughing;
|
Acceptable
|
 |
GTEX-S4Q7
|
21-40
|
Male
|
GTEX-S4Q7-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~9x3mm. Mucosa reasonably well-preserved, ~10% of thickness
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~6x2mm; mucosa moderately well-preserved, ~10-15% of thickness
|
Acceptable
|
 |
GTEX-S4Z8
|
61-70
|
Male
|
GTEX-S4Z8-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 11x4 mm;
|
Acceptable
|
 |
GTEX-S7PM
|
61-70
|
Male
|
GTEX-S7PM-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~7x1.5mm. Mucosa totally sloughed
|
Acceptable
|
 |
GTEX-S7SE
|
51-60
|
Male
|
GTEX-S7SE-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, 7x2mm. Mucosa totally autolyzed
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6x4 mm; good mucosal morphology; full thickness wall
|
Acceptable
|
 |
GTEX-S95S
|
51-60
|
Male
|
GTEX-S95S-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~8x3mm, only three with visible mucosa, poorly oriented
|
Acceptable
|
 |
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-1526 |
Colon, transverse
|
PAXgene |
0
|
6 pieces up to 7x4 mm; mucosa ~0.4 mm; very good mucosal preservation in all 6 pieces
|
Acceptable
|
 |
GTEX-SIU8
|
51-60
|
Male
|
GTEX-SIU8-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~7x1.5mm, mucosa badly autolyzed &/or sloughing
|
Acceptable
|
 |
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~8x2mm, mucosa badly autolyzed
|
Acceptable
|
 |
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~7x2mm. Mucosa with near-total autolysis
|
Acceptable
|
 |
GTEX-SNMC
|
21-40
|
Male
|
GTEX-SNMC-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 8x4 mm; well preserved mucosa; well visualized ganglion cells
|
Acceptable
|
 |
GTEX-SNOS
|
41-50
|
Male
|
GTEX-SNOS-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 7x3 mm; good mucosal preservation
|
Acceptable
|
 |
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-1026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6x3 mm; 3 have mucosa without muscularis, 3 have muscularis without mucosa
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~6x2mm. Mucosa completely autolyzed/sloughed
|
Acceptable
|
 |