GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with some dispersed residual lymphoid component, muscularis also present (not target)
|
Unacceptable
|
 |
GTEX-1F6I4
|
51-60
|
Male
|
GTEX-1F6I4-2926 |
Minor salivary glands
|
PAXgene |
1
|
1 piece; lip, stroma, and fat
|
Unacceptable
|
 |
GTEX-1F6IF
|
61-70
|
Male
|
GTEX-1F6IF-0626 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, 70% fibrous tissue, insufficient adipose for target GTEx tissue
|
Unacceptable
|
 |
GTEX-1F6RS
|
61-70
|
Female
|
GTEX-1F6RS-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; insufficient lymphoid tissue; mucosa autolyzed
|
Unacceptable
|
 |
GTEX-1F75B
|
51-60
|
Male
|
GTEX-1F75B-1926 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; mucosa absent/autolyzed and moderately autolyzed submucosa, submucosal glands (outlined), minute fragments of residual squamous epithelium (arrows); scattered lymphoid aggregates in submucosa
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-0926 |
Coronary artery
|
PAXgene |
2
|
2 pieces; extensive calcified atheromatous plaque with no normal tissue remaining
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-1726 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; all adipose tissue, no adrenal present
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-1826 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; 1.5 mm renal cell neoplasm in 1 piece; autolysis does not permit assessment of malignancy; by size (in this section) it is consistent with adenoma
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-2626 |
Testis
|
PAXgene |
1
|
2 pieces; fibrous tissue, NO testis
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-2826 |
Stomach
|
PAXgene |
3
|
6 pieces; completely autolyzed tissue
|
Unacceptable
|
 |
GTEX-1F75W
|
61-70
|
Male
|
GTEX-1F75W-2926 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; largely fibroadipose tissue with small foci of atrophic ducts in scar tissue and lymphoid cells consistent with glandular atrophy; no viable salivary glands
|
Unacceptable
|
 |
GTEX-1F7RK
|
21-40
|
Female
|
GTEX-1F7RK-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; thymus, not thyroid
|
Unacceptable
|
 |
GTEX-1F7RK
|
21-40
|
Female
|
GTEX-1F7RK-1426 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; muscularis with significant residual autolyzed mucosa (squamous/gastric) and inflammation
|
Unacceptable
|
 |
GTEX-1F88E
|
61-70
|
Female
|
GTEX-1F88E-2626 |
Ileum
|
PAXgene |
3
|
4 pieces. glandular mucosa completely autolyzed/sloughed; insufficient residual lymphoid aggregates to warrant attempted molecular analysis
|
Unacceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; up to 50% admixed skeletal muscle
|
Unacceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-1826 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and lymphoid tissue; muscularis present
|
Unacceptable
|
 |
GTEX-1F88F
|
61-70
|
Female
|
GTEX-1F88F-2026 |
Uterus
|
PAXgene |
3
|
2 pieces; epithelium autolyzed; not uterus; probably bladder
|
Unacceptable
|
 |
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0426 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; muscularis, not mucosa; single focus of submucosal glands and detached fragment of squamous epithelium
|
Unacceptable
|
 |
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-0626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; muscularis with significant component of squamous and gastric mucosa with hemorrhage and ulcer
|
Unacceptable
|
 |
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1026 |
Ileum
|
PAXgene |
1
|
6 pieces; full thickness colon, not ileum
|
Unacceptable
|
 |
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; predominantly mucosa (not target), with small proportion of muscularis
|
Unacceptable
|
 |
GTEX-1FIGZ
|
41-50
|
Male
|
GTEX-1FIGZ-1826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; fat and fibrous tissue, not nerve
|
Unacceptable
|
 |
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; predominantly fat and portion of myocardium, minimal artery (<10%)
|
Unacceptable
|
 |
GTEX-1GF9U
|
41-50
|
Female
|
GTEX-1GF9U-1426 |
Ileum
|
PAXgene |
1
|
5 pieces; predominantly mucosa with rare lymphoid follicle
|
Unacceptable
|
 |
GTEX-1GF9W
|
61-70
|
Male
|
GTEX-1GF9W-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; predominantly autolyzed mucosa with some residual target lymphoid aggregates (< 20% of tissue)
|
Unacceptable
|
 |