GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; gynecomastoid features: prominent ducts in fibrous stroma
|
Acceptable
|
 |
GTEX-1P4AB
|
51-60
|
Male
|
GTEX-1P4AB-0626 |
Aorta
|
PAXgene |
1
|
6 pieces; slight fibrous intimal thickening; no plaques; small calcific deposit in 2 pieces; generally well trimmed
|
Acceptable
|
 |
GTEX-1P4AB
|
51-60
|
Male
|
GTEX-1P4AB-1426 |
Spleen
|
PAXgene |
2
|
2 pieces; not heavily congested; prominent fibrous septae in 1
|
Acceptable
|
 |
GTEX-1PBJJ
|
21-40
|
Male
|
GTEX-1PBJJ-1126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, congested
|
Acceptable
|
 |
GTEX-1PDJ9
|
21-40
|
Male
|
GTEX-1PDJ9-0326 |
Skin, leg
|
PAXgene |
1
|
6 pieces; thick subcutaneous fat up to 1.6mm in 3 pieces; dermal fat 10%
|
Acceptable
|
 |
GTEX-1PDJ9
|
21-40
|
Male
|
GTEX-1PDJ9-0626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; minimal focal intimal fibrous thickening; well dissected; no fat in adventitia
|
Acceptable
|
 |
GTEX-1PDJ9
|
21-40
|
Male
|
GTEX-1PDJ9-1826 |
Ileum
|
PAXgene |
1
|
4 pieces; 50% lymphoid content in mucosa & submucosa
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0226 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; sliver of tendon in 1 piece, 2% of area [arrowed]
|
Acceptable
|
 |
GTEX-1PIGE
|
21-40
|
Male
|
GTEX-1PIGE-0526 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 20% fibrous content in 1 piece, 5% in other
|
Acceptable
|
 |
GTEX-1PPH6
|
61-70
|
Female
|
GTEX-1PPH6-2226 |
Ileum
|
PAXgene |
2
|
6 pieces; abundant partly autolyzed lymphoid tissue in 5 of 6 pieces; all have full thickness muscularis propria; LCM
|
Unacceptable
|
 |
GTEX-1PPH7
|
41-50
|
Male
|
GTEX-1PPH7-1926 |
Ileum
|
PAXgene |
2
|
6 pieces; muscularis propria present in all; minimal lymphoid tissue content
|
Unacceptable
|
 |
GTEX-1PPH8
|
21-40
|
Male
|
GTEX-1PPH8-1426 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular hyperplastic pattern in one section; other is largely stromal with prominent peri-prostatic ganglion delineated
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 10% stromal & vascular content in 1 piece
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-0326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; well dissected; no dermal fat; single large hair complex in several pieces
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1026 |
Liver
|
PAXgene |
1
|
2 pieces; moderate increase in portal tract lymphocytes
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 10% fibrous content in one
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1226 |
Omentum
|
PAXgene |
1
|
2 partly fragmented pieces; 10% fibrous content in one
|
Acceptable
|
 |
GTEX-1QAET
|
51-60
|
Male
|
GTEX-1QAET-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis propria; several very small foci of skeletal muscle up to 0.05mmsq in 3 pieces [labeled], <1% area
|
Acceptable
|
 |
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, mucosa and muscularis; no target lymphoid aggregates in mucosa
|
Unacceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 1 with 25% fibrous content; other with 30% fascia, 30% fibrous stroma; calcium deposits in both
|
Acceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-2326 |
Ileum
|
PAXgene |
3
|
6 pieces; mucosa totally autolyzed; no lymphoid collections; muscularis in all; (resembles colon)
|
Unacceptable
|
 |
GTEX-1QEPI
|
61-70
|
Female
|
GTEX-1QEPI-2826 |
Vagina
|
PAXgene |
2
|
6 pieces; mucosa largely sloughed; marked chronic inflammation and reactive atypia in remaining epithelium
|
Unacceptable
|
 |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-1726 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present in 3; advanced autolysis
|
Acceptable
|
 |
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2926 |
Prostate
|
PAXgene |
2
|
2 pieces, advanced glandular autolysis; by pattern and yellow pigment in autolyzed mucosa (rep ensquared) this is seminal vesicle, not prostate
|
Unacceptable
|
 |
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-2126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; only focal superficial desquamation; stratified squamous epithelium measures ~ 0.2mm in thickness; submucosal glands (outlined) and dystrophic calcifications (arrows)
|
Acceptable
|
 |