GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces. 10x4 & 13x4mm; autolysis varies from 2-3; 20% external adipose
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-1926 |
Pancreas
|
PAXgene |
3
|
2 pieces. 9.5x6.5 & 10x9mm; autolysis varies from 2 to 3 (annotated); 10 and 30% intra and extrapancreatic adipose.
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces. up to 7x3mm; tubules 2-3; all cortex; no notable chronic glomerular or vascular lesions
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2126 |
Stomach
|
PAXgene |
3
|
6 pieces. up to 8x3mm; mucosa=3;muscle=2 (autolysis)
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2226 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces. up to 10x4mm; well trimmed, all muscularis propria
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2326 |
Ovary
|
PAXgene |
1
|
2 pieces. 9x8 & 9x8mm; atrophic, several corpora albicans
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2426 |
Uterus
|
PAXgene |
1
|
2 pieces. 10x9 & 10x9mm; no endometrium, all myometrium
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2526 |
Vagina
|
PAXgene |
2
|
6 pieces. up to 7x3mm; largely sloughed epithelium
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2626 |
Skin, suprapubic
|
PAXgene |
2
|
6 pieces. up to 7x3mm; up to 1 mm subcutaneous adipose
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2726 |
Ileum
|
PAXgene |
2
|
4 pieces. up to 8x5mm; small amount of lymphoid tissue collected (annotated); extraneous muscle also collected
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces. up to 5x2mm; mucosa=3; muscularis=2
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces. up to 8x4mm; muscularis and submucosal stroma
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces. up to 8x3mm; squamous epithelium is ~2-3% thickness
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces. 9x7 & 9x8mm; ~10% fibrous components, delineated
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces. 5x3 & 5x3mm; discontinuous adherent fat ~0.5mm, delineated
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces. 3x2 & 3x2mm; atherosclerotic occlusion ~60-70% of lumen
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces. 9x6 & 8x7mm; focal adipose tissue delineated (~5% tissue)
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0626 |
Testis
|
PAXgene |
2
|
2 pieces. 7x5 & 9x7mm; spermatogenesiis present but poorly preserved
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0726 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces. up to 7.5x3mm; squamous epithelium is ~4-5% thickness
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0826 |
Liver
|
PAXgene |
1
|
2 pieces. 9x8 & 10x8mm; minimal steatosis
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-0926 |
Spleen
|
PAXgene |
3
|
2 pieces. 8x6.5 & 9x8mm;
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1026 |
Omentum
|
PAXgene |
1
|
2 pieces. 11x7 & 10x7mm;
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1126 |
Pancreas
|
PAXgene |
2
|
2 pieces. 9x8 & 11x7.5mm; moderate-severe saponification. Islets poorly seen; a few encircled
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces. 8.5x7 & 8.5x7mm;
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces. 10x8 & 11x7mm; mainly fat, focal fibrous areas, no ductal elements noted
|
Acceptable
|
|