GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; predominantly dense fibrous stroma with minimal adipose tissue and several scattered ductal structures
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1326 |
Omentum
|
PAXgene |
1
|
2 pieces; mature adipose tissue, few central defects (? adequate fixation)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1426 |
Liver
|
PAXgene |
1
|
2 pieces; congestion and mild steatosis, includes portion of capsule (not target)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1526 |
Pancreas
|
PAXgene |
2
|
2 pieces; 30% and 5% internal fat; fairly prominent islets (rep outlined), moderate to severe autolysis
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1626 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion; 1 piece is ~40% vessels/fibrous tissue (outlined)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; congestion; ~0.28mm thick squamous epithelium
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis; congested submucosa on 3 of 6 (arrows)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, 2 of 6 with attached fat (arrows)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2026 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately and focally severly autolyzed adrenal cortex; 90% and 40% external fat
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; congested renal cortex, arteriosclerosis (rep outlined), small amount of fat attached to 3 of 6 pieces (arrows)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; few include autolyzed mucosa (outlined), muscularis is better preserved
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and too few (mostly autolyzed) lymphoid aggregates to warrant analysis (outlined), muscularis is also present (not target)
|
Unacceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2526 |
Stomach
|
PAXgene |
2
|
6 pieces; moderately to severely autolyzed gastric mucosa, muscularis is better preserved
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; ~10% to 15% internal fat on 4 of 6 pieces (outlined), few tissue defects
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2726 |
Prostate
|
PAXgene |
2
|
2 pieces; moderate to severe glandular autolysis with abundance of coropora amylacea
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2826 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis present but decreased; congestion
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-2926 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; ~5% to 10% internal fat (outlined)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces; moderate autolysis
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; Purkinje cells observed
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-3226 |
Pituitary gland
|
PAXgene |
2
|
1 piece; mildly to moderately autolyzed adenohypophysis and neurohypophysis
|
Acceptable
|
 |
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~20-30 microns
|
Acceptable
|
 |
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, fascia/vascular elements are ~10-15% of tissue
|
Acceptable
|
 |
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements are ~10% of tissue
|
Acceptable
|
 |
GTEX-1C64O
|
61-70
|
Male
|
GTEX-1C64O-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, minimal adherent fat
|
Acceptable
|
 |