GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-0926 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponfication in some foci; Islets stiil visible ( rep encircled), beginning to degrade
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1026 |
Omentum
|
PAXgene |
1
|
2 pieces, ~10% fascia/vascular elements
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements only
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1226 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, squamous mucosa up to ~0.5mm, beginning to slough; submucosal mucus glands, delineated
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1626 |
Colon, sigmoid
|
PAXgene |
1
|
4 pieces, confirmed target muscularis; adherent fat up to ~3mm, rep delineated
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1726 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is ~60-70 microns
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1826 |
Prostate
|
PAXgene |
1
|
2 pieces, some glandular elements approach score '2'; hyperplastic glandular pattern
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-1926 |
Testis
|
PAXgene |
2
|
2 pieces spermatogenesis appears adequate
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-2026 |
Minor salivary glands
|
PAXgene |
1
|
4 pieces, 3 are glandular/ductal elements (delineated), one piece is squamous mucosa
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa up to ~0.3mm, moderately autolyzed
|
Acceptable
|
 |
GTEX-1C4CL
|
21-40
|
Male
|
GTEX-1C4CL-2226 |
Stomach
|
PAXgene |
1
|
6 pieces, mainly adipose tissue, trace muscularis; no mucosa
|
Unacceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0126 |
Skin, leg
|
PAXgene |
1
|
5 pieces; ~10% to 20% internal fat; epidermis is ~30 microns thick
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue and 5% and 15% fibrovascular component
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; one contains 10% internal fat and other 5% internal and 5% external fat
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; ~20% to 30% internal/external fat (outlined)
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; 1 piece with eccentric atherosclerotic plaque with ~75% luminal compromise and up to 1.3mm attached external fat, second piece is tangentially cut, both include >50% fat
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0726 |
Heart
|
PAXgene |
1
|
2 pieces; some interstitial fibrosis
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; one is ~40% fibrous/fatty
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-0926 |
Aorta
|
PAXgene |
1
|
6 pieces; some atherosclerosis, up to 1.2mm attached adventitia
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1026 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; some interstitial fibrosis
|
Acceptable
|
 |
GTEX-1C64N
|
51-60
|
Male
|
GTEX-1C64N-1126 |
Lung
|
PAXgene |
2
|
2 pieces; includes pleura (not target), severe congestion with intra-alveolar hemorrhage
|
Acceptable
|
 |