GTEX-X585
|
51-60
|
Male
|
GTEX-X585-0926 |
Heart
|
PAXgene |
2
|
2 pieces, 10x7 & 9x7.5mm; Scattered foci of fibrosis. 0.5 mm thick subpericardial adipose on one side of larger piece.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1026 |
Lung
|
PAXgene |
2
|
2 pieces, 9x7 & 8x7mm; Mucopurulent exudates in bronchi, but no pneumonia.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1126 |
Aorta
|
PAXgene |
2
|
6 pieces, up to 8x2mm; Mild plaque formation.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 7x2mm; Well dissected mucosa with some epithelial detachment.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1326 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 8x3mm; Well trimmed, muscularis free of adipose.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1426 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 9x4mm; Muscle with outer bands of adipose tissue up to 1.5 mm thick (should be trimmed of adipose)..
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1526 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, 7x6 & 9x6mm; Foci of fibrosis.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 9x9 & 10x7mm; Fibroadipose tissue without ducts.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1726 |
Liver
|
PAXgene |
2
|
2 pieces, up to 8x7 & 7x7mm; No fat.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1826 |
Spleen
|
PAXgene |
2
|
2 pieces, 7x6 & 7x6mm;
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1926 |
Pancreas
|
PAXgene |
2
|
2 pieces, 9x7 & 8x7mm; Several calcified small arteries. 10% internal adipose in one piece
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2026 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 11x7 & 4x1mm; 1.5 mm adipose along long edge of smaller piece
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7x3mm; Patchy glomerulosclerosis.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2226 |
Ileum
|
PAXgene |
2
|
4 pieces, up to 7x2mm; mucosa=3; lymphoid tissue=2 (autolysis); well dissected for Peyer Patches (annotated)
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 9.5x2mm; Glands = 3; muscle = 2.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2426 |
Skin, suprapubic
|
PAXgene |
2
|
6 pieces, up to 7x3mm; Up to 1 mm subcutaneous adipose
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2526 |
Omentum
|
PAXgene |
0
|
2 pieces, 8x7 & 9x6mm; No artifacts.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x3mm; Glands = 3; muscle = 2.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2726 |
Prostate
|
PAXgene |
3
|
2 pieces, 7x6 & 8x8mm; Glands = 3; stroma = 2.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 9x2mm; Well trimmed muscle. 10% subserosal adipose on 2 pieces.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2926 |
Brain - cortex
|
PAXgene |
2
|
4 pieces, up to 5x4mm; Cerebrum, not cerebellum. Relabel as Brain cortex.
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-3026 |
Brain - cortex
|
PAXgene |
2
|
4 pieces, up to 5x5mm;
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-3126 |
Pituitary gland
|
PAXgene |
2
|
1 piece, 8x8mm; Mostly anterior pit.; 2x2 mm posterior pituitary.
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 7x2mm; squamous epitheiium is ~2% of thickness
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 8x6 & 9x8mm; 50% fibirous tissue, rep areas delineated. Contaminant squamous epithelium, encircled
|
Acceptable
|
|