GTEX-QLQ7
|
61-70
|
Male
|
GTEX-QLQ7-1126 |
Colon, transverse
|
PAXgene |
1
|
6 ~8.5x3mm pieces; mucosa is generally well-preserved, ~ 10% of thickness
|
Acceptable
|
|
GTEX-QLQW
|
21-40
|
Male
|
GTEX-QLQW-0426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 8x3 mm; ~540um thick mucosa; muscularis propria on 4 pieces
|
Acceptable
|
|
GTEX-QMR6
|
51-60
|
Male
|
GTEX-QMR6-2626 |
Colon, transverse
|
PAXgene |
3
|
6 ~9x2mm pieces. Epithelial component of mucosa badly autolyzed; mucosa is ~10% of thickness
|
Acceptable
|
|
GTEX-QMRM
|
51-60
|
Male
|
GTEX-QMRM-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6.5x3 mm; good mucosal preservation; moderate histologic tissue tears
|
Acceptable
|
|
GTEX-QV31
|
21-40
|
Male
|
GTEX-QV31-0826 |
Colon, transverse
|
PAXgene |
1
|
6 ~7.5x3mm pieces; mucosa well-preserved, ~15-40% of thickness
|
Acceptable
|
|
GTEX-QV44
|
51-60
|
Male
|
GTEX-QV44-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 10.5x4.6 mm; focal tissue tears
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2426 |
Colon, transverse
|
PAXgene |
3
|
6 ~8x2mm pieces. Mucosa totally autolyzed, many have adherent fat/fibrovascular tissue fragments
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-2426 |
Colon, transverse
|
PAXgene |
3
|
6 ~8.5x1.5mm pieces, epithelial portions of mucosa with near total total autolysis.
|
Acceptable
|
|
GTEX-QXCU
|
51-60
|
Male
|
GTEX-QXCU-2026 |
Colon, transverse
|
PAXgene |
2
|
6 ~8x2mm pieces; mucosa is 10-20% of thickness
|
Acceptable
|
|
GTEX-R3RS
|
41-50
|
Female
|
GTEX-R3RS-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8.3x2.6 mm; mucosa completely autolyzed; muscle moderately autolyzed;
|
Acceptable
|
|
GTEX-R45C
|
61-70
|
Female
|
GTEX-R45C-2126 |
Colon, transverse
|
PAXgene |
3
|
8 pieces up to 7.4x1.2 mm; mucosa completely autolyzed, muscularis slight to moderate autolysis
|
Acceptable
|
|
GTEX-R53T
|
51-60
|
Female
|
GTEX-R53T-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~8x2mm. Mucosa moderately well preserved, ~10-15% of thickness
|
Acceptable
|
|
GTEX-R55C
|
41-50
|
Male
|
GTEX-R55C-1126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 8x5 mm; 5 of 6 have mucosa
|
Acceptable
|
|
GTEX-R55D
|
51-60
|
Male
|
GTEX-R55D-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa less well preserved, 15-20% of thickness
|
Acceptable
|
|
GTEX-R55E
|
21-40
|
Male
|
GTEX-R55E-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 6.7x2 mm; mucosa almost totally autolyzed; muscle slight to moderate fragmentation
|
Acceptable
|
|
GTEX-R55F
|
51-60
|
Male
|
GTEX-R55F-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2.5 mm; mucosa completely autolyzed; muscle slightly autolyzed
|
Acceptable
|
|
GTEX-R55G
|
41-50
|
Female
|
GTEX-R55G-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~9x3mm. Mucosa well preserved, ~10-15% of thickness
|
Acceptable
|
|
GTEX-REY6
|
61-70
|
Male
|
GTEX-REY6-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 6x2.7 mm; patchy preserved mucosa, otherwise autolyzed; muscle slight autolysis
|
Acceptable
|
|
GTEX-RM2N
|
51-60
|
Male
|
GTEX-RM2N-0926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~6x1.2mm. Mucosa moderately well preserved, ~30% of thickness
|
Acceptable
|
|
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-0726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~7x1.5mm. Mucosa nearly totally autolyzed and/or sloughed
|
Acceptable
|
|
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, ~7x1.5. Mucosal glands badly autolyzed, ~15-20% of thickness
|
Acceptable
|
|
GTEX-RNOR
|
51-60
|
Female
|
GTEX-RNOR-2026 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x3 mm; mucosa totally autolyzed; muscularis slightly autolyzed; 0.6 mm squamous "floater"
|
Acceptable
|
|
GTEX-RTLS
|
61-70
|
Female
|
GTEX-RTLS-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2 mm; mucosa largely autolyzed; muscle mildly autolyzed
|
Acceptable
|
|
GTEX-RU1J
|
21-40
|
Female
|
GTEX-RU1J-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 7.6x8.7 mm; surface partially sloughed
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, ~6.5x2.5. Mucosa moderately autolyzed, ~ 10--15% of thickness
|
Acceptable
|
|