GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces ~ 5x2mm, squamous mucosa is ~10-15% thickness
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~7x7mm
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1026 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, ~ 2mm d. Good clean specimens, no atherosclerosis
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1126 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, ~4mm d. Good clean specimens
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1226 |
Liver
|
PAXgene |
1
|
2 pieces ~6x6mm, no steatosis
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1326 |
Spleen
|
PAXgene |
2
|
2 pieces ~8x6mm
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1426 |
Pancreas
|
PAXgene |
3
|
2 pieces ~7x7mm, marked autolysis, post mortem saponification
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces ~ 10x8mm. Large areolar ductal units, fibrotic stroma
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1626 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all fat, not adrenal, not suitable for analysis
|
Unacceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces ~6x3mm, tubules autolyzed
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1826 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces ~ 7x7mm; all medulla!!! Tubules autolyzed
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-1926 |
Vagina
|
PAXgene |
1
|
6 pieces, ~7x3mm, squamous mucosa is ~5-10% thickness
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2026 |
Ovary
|
PAXgene |
1
|
2 pieces ~7x6mm. Oocytes present, one cumulous oophorous noted, + hemorrhagic cyst.
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2126 |
Fallopian tube
|
PAXgene |
2
|
2 pieces ~3mm d. Epithelium with near-total autolysis
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2226 |
Uterus
|
PAXgene |
2
|
2 pieces, ~8mm x 8mm. 2x2mm focus of totaly autolyzed endometrium in one aliquot
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2326 |
Cervix - ectocervix
|
PAXgene |
1
|
4 pieces ~4x3mm, only one aliquot with ~5% squamous ectocervical mucosa
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2426 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces, ~3.5 x 3.5mm, no mucosal glands
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2526 |
Urinary bladder
|
PAXgene |
2
|
6 pieces ~8x2.5mm, urothelium completely sloughed
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~11x6mm, minimal interstitial fat
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, ~6x2mm. Mucosa completely autolyzed/sloughed
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2826 |
Stomach
|
PAXgene |
2
|
6 pieces, ~8x2.5mm. Mucosa present, moderately autolyzed, ~40-50% of thickness
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, ~5x5mm
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, ~4.5x4.5mm
|
Acceptable
|
 |
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece, ~5x5mm, reasonably well preserved for an endocrine organ
|
Acceptable
|
 |
GTEX-T5JW
|
21-40
|
Female
|
GTEX-T5JW-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, ~8x7mm.
|
Acceptable
|
 |