there is hardly any mucosa in this section, only muscularis. 625 and 725 have been switched and should be relabeled. 625 is muscularis propria. 725 is mucosa (the muscle present is muscularis mucosae). Inform BSS and LDACC of switch.
Acceptable
GTEX-OHPL
61-70
Female
GTEX-OHPL-0726
Esophagus - mucosa
PAXgene
0
Good epithelium
Acceptable
GTEX-OHPM
51-60
Male
GTEX-OHPM-0626
Esophagus - mucosa
PAXgene
0
Mucosa is from 15---35% total specimen thickness
Acceptable
GTEX-OHPN
61-70
Female
GTEX-OHPN-1026
Esophagus - mucosa
PAXgene
1
Mucosa present; approximately 7-9% total specimen thickness
Acceptable
GTEX-OIZF
61-70
Male
GTEX-OIZF-0626
Esophagus - mucosa
PAXgene
1
Epithelium is 10% of aliquot thickness
Acceptable
GTEX-OIZG
51-60
Male
GTEX-OIZG-1026
Esophagus - mucosa
PAXgene
0
3 pieces up to 8x2 mm. Squamous hyperplasia. Large submucosal glands in one piece
Acceptable
GTEX-OIZH
51-60
Male
GTEX-OIZH-0626
Esophagus - mucosa
PAXgene
0
Mucosa averages 20-25% thickness of specimen thickness0
Acceptable
GTEX-OIZI
41-50
Male
GTEX-OIZI-1426
Esophagus - mucosa
PAXgene
1
Squamous mucosa with prominent muscularis mucosae
Acceptable
GTEX-OOBJ
61-70
Male
GTEX-OOBJ-0626
Esophagus - mucosa
PAXgene
1
Epithelial thickness 400-500 microns, 20-30% of section thickness. Focal soft tissue areas appear underfixed
Acceptable
GTEX-OOBK
41-50
Male
GTEX-OOBK-0625
Esophagus - mucosa
PAXgene
1
0-1. Epithelial thickness ranges from 245-445microns.
Acceptable
GTEX-OXRK
51-60
Female
GTEX-OXRK-1326
Esophagus - mucosa
PAXgene
1
Squamous epithelium 0.2 mm thick; scattered fracture defects
Acceptable
GTEX-OXRL
51-60
Male
GTEX-OXRL-0626
Esophagus - mucosa
PAXgene
1
Well preserved squamous epithelium. 5.5x3.8mm
Acceptable
GTEX-OXRN
51-60
Male
GTEX-OXRN-1726
Esophagus - mucosa
PAXgene
1
Well preserved squamous layer. 9.5x1.7mm
Acceptable
GTEX-OXRO
61-70
Female
GTEX-OXRO-0426
Esophagus - mucosa
PAXgene
2
3 pieces 5.6x1.2mm. No
epithelium; wall autolyzed
Acceptable
GTEX-OXRP
61-70
Female
GTEX-OXRP-0926
Esophagus - mucosa
PAXgene
1
3 10x1mm pieces. Mucosa is ~10% of specimen thickness
Acceptable
GTEX-P44G
21-40
Male
GTEX-P44G-1426
Esophagus - mucosa
PAXgene
1
Three ~5mm tissue fragments. ? origin. No mucosa seen
Unacceptable
GTEX-P44H
41-50
Male
GTEX-P44H-1326
Esophagus - mucosa
PAXgene
2
3 `6x2.5mm pieces. Mucosa near totally sloughed, a few foci look glandular. ? location-GE junction?
Acceptable
GTEX-P4PP
21-40
Female
GTEX-P4PP-0626
Esophagus - mucosa
PAXgene
1
3 ~6x2mm pieces. Squamous mucosa is 20-25% of thickness
Acceptable
GTEX-P4PQ
51-60
Male
GTEX-P4PQ-0626
Esophagus - mucosa
PAXgene
1
4 ~4x3mm pieces. Squamous mucosa is ~8-10% of thickness
Acceptable
GTEX-P4QR
61-70
Male
GTEX-P4QR-2126
Esophagus - mucosa
PAXgene
2
6 ~ 7x3mm pieces. Squamous mucosa is ~10% of thickness
Acceptable
GTEX-P4QS
61-70
Male
GTEX-P4QS-0626
Esophagus - mucosa
PAXgene
1
6 ~6x2mm pieces. Squamous mucosa is ~10% of thickness. Patchy focally intense chronic esophagitis
Acceptable
GTEX-P4QT
41-50
Female
GTEX-P4QT-0626
Esophagus - mucosa
PAXgene
1
6 pieces ~4x4mm. Squamous mucosa is 10-15% of thickness