GTEX-1KWVE
|
21-40
|
Male
|
GTEX-1KWVE-2626 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue, but muscularis present in all; LCM
|
Unacceptable
|
 |
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; intradermal nevus in 2 of 6 pieces [labeled]; well trimmed; 1% dermal fat
|
Acceptable
|
 |
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; minimal intimal thickening; several small calcium deposits in media; well trimmed
|
Acceptable
|
 |
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-1026 |
Heart
|
PAXgene |
1
|
2 pieces; no acute changes; enlarged nuclei; slight increase in interstitial fibrous tissue
|
Acceptable
|
 |
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; minute submucosal gland 0.3 mm [labeled]; 25% fat in 1 pair
|
Acceptable
|
 |
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-2726 |
Ileum
|
PAXgene |
2
|
6 pieces; abundant lymphoid tissue in several pieces; mucosa autolyzed
|
Acceptable
|
 |
GTEX-1LB8K
|
51-60
|
Male
|
GTEX-1LB8K-3126 |
Brain - cortex
|
PAXgene |
1
|
4 pieces; outer, convex edges appear pale: possible artifact (not seen in cerebellum)
|
Acceptable
|
 |
GTEX-1LBAC
|
21-40
|
Male
|
GTEX-1LBAC-0926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; predominantly fat with 15-40% stroma, no ductal elements in this section
|
Acceptable
|
 |
GTEX-1LGRB
|
51-60
|
Female
|
GTEX-1LGRB-2226 |
Uterus
|
PAXgene |
0
|
2 pieces; myometrium, prominent vessels, no endometrium in these sections
|
Acceptable
|
 |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-1426 |
Spleen
|
PAXgene |
2
|
2 pieces; moderate vascular congestion in red pulp; well defined lymphoid tissue (white pulp)
|
Acceptable
|
 |
GTEX-1LSVX
|
61-70
|
Male
|
GTEX-1LSVX-2126 |
Testis
|
PAXgene |
1
|
2 pieces; slight reduction in mature spermatogenesis
|
Acceptable
|
 |
GTEX-1LVA9
|
51-60
|
Male
|
GTEX-1LVA9-1526 |
Ileum
|
PAXgene |
3
|
2 pieces; moderately to severely autolyzed, but with significant lymphoid component in 5 of 6 pieces, one piece is muscularis only
|
Unacceptable
|
 |
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-0826 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; 70% external fat in 1, 40% fat in other
|
Acceptable
|
 |
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; lobular and ductal elements in predominantly fibrous stroma; 10% fat content
|
Acceptable
|
 |
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-1926 |
Uterus
|
PAXgene |
0
|
2 pieces; atrophic endometrium in 1 piece with myometrial predominance; myometrium only in other piece (in this cut)
|
Acceptable
|
 |
GTEX-1LVAN
|
51-60
|
Female
|
GTEX-1LVAN-2326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; focal submucosal glands in 2 pieces
|
Acceptable
|
 |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-0926 |
Coronary artery
|
PAXgene |
1
|
2 pieces; moderate intimal fibrous thickening in 1; other has marked atheromatous calcified plaque; well trimmed
|
Acceptable
|
 |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-1926 |
Testis
|
PAXgene |
1
|
2 pieces; moderate reduction in mature spermatogenesis; no scarring
|
Acceptable
|
 |
GTEX-1LVAO
|
61-70
|
Male
|
GTEX-1LVAO-2926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; 3 have mucosa moderately autolyzed; 3 have mucosa totally autolyzed; muscularis intact in all
|
Acceptable
|
 |
GTEX-1M4P7
|
61-70
|
Male
|
GTEX-1M4P7-0926 |
Liver
|
PAXgene |
1
|
2 pieces, macrovesicular steatosis in ~10% of parenchyma. Focal areas approach autolysis score 2
|
Acceptable
|
 |
GTEX-1M5QR
|
41-50
|
Male
|
GTEX-1M5QR-0926 |
Pancreas
|
PAXgene |
1
|
2 pieces; both include internal and attached fat, up to 50% in one piece, mild fibrosis
|
Acceptable
|
 |
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-1126 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~1mm, ~20% of thickness; microcystic gland dilation with actue inflammation/cell necrosis in microcysts (based on review of glass slide; concurrence within PRC)
|
Acceptable
|
 |
GTEX-1MCC2
|
21-40
|
Female
|
GTEX-1MCC2-1926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; three pieces contain target squamous epithelium measuring ~ 0.3mm in thickness; focal superficial desquamation; well preserved muscularis
|
Acceptable
|
 |
GTEX-1MCC2
|
21-40
|
Female
|
GTEX-1MCC2-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibroadipose tissue and ductal structures embedded in dense hyalinized stroma
|
Acceptable
|
 |
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-0126 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; slight intimal thickening; 2 calcific Monkeberg lesions in media of 1 piece; well dissected
|
Acceptable
|
 |