GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1126 |
Spleen
|
PAXgene |
3
|
2 pieces ~8x5mm. Moderate congestion, poorly preserved
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1226 |
Pancreas
|
PAXgene |
3
|
2 pieces, ~10x7mm. ~30% interstitial or adherent fat, marked saponification and autolysis
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1326 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces ~5x1.5mm. Squamous mucosa sloughing, ~1% of thickness where present
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~7x2.5mm
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, ~7x6mm
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1626 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces ~8x5mm. Minute foci of atrophic TLDUs in one aliquot, encircled, mucosa poorly preserved
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1726 |
Adrenal glands
|
PAXgene |
3
|
2 pieces ~15x5mm. Mainly cortex, minute focus of badly autolyzed medulla visible in one aliquot, encircled. ** Gross impression of abnormality noted; no histologic abnormality seen**
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1826 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, ~7x3.5mm. Tubules badly autolyzed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-1926 |
Kidney - cortex
|
PAXgene |
3
|
2 pieces ~8x8mm, all cortex, a ~3mm nodule of fat in one, encircled. Tubules badly autolyzed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2026 |
Urinary bladder
|
PAXgene |
3
|
6 pieces ~8x3mm, urothelium completely sloughed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2126 |
Cervix - ectocervix
|
PAXgene |
2
|
4 pieces ~5x4mm, prominent Nabothian cysts noted
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2226 |
Cervix - endocervix
|
PAXgene |
2
|
4 pieces ~5x4mm, no mucosa visible
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2326 |
Fallopian tube
|
PAXgene |
3
|
2 pieces ~2.5mm d, mucosa completely sloughed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2426 |
Ovary
|
PAXgene |
1
|
2 pieces ~8x8mm. One aliquot with marked congestion approaching hemorrhagic infarction
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2526 |
Uterus
|
PAXgene |
3
|
2 pieces /`8x8mm, endometrium totally autolyzed in one, absent in the other
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2626 |
Vagina
|
PAXgene |
2
|
6 pieces ~9x3mm. Squamous mucosa nearly completely sloughed
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~7x2mm. Mucosa with near-total autolysis
|
Acceptable
|
|
GTEX-SN8G
|
51-60
|
Female
|
GTEX-SN8G-2826 |
Stomach
|
PAXgene |
2
|
6 pieces ~8x3mm. Mucosa up to ~50% of thickness, badly autolyzed in most aliquots
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~ 6x3mm. Squamous epithelium is ~2-3% of thickness
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0226 |
Adipose tissue
|
PAXgene |
0
|
2 ~8x7 mm pieces
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0326 |
Coronary artery
|
PAXgene |
1
|
1 aliquot ~3x3mm, 90+% fat/myocardium surrounding 0.5x1mm vessel, too small for accurate isolation
|
Unacceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0426 |
Heart
|
PAXgene |
1
|
2 pieces, ~6x6mm, mimimal ischemic changes
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0526 |
Lung
|
PAXgene |
1
|
2 pieces ~9x4mm, mild-moderate emphysematous changes
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, ~8x7mm. Good clean specimens
|
Acceptable
|
|
GTEX-T2IS
|
21-40
|
Female
|
GTEX-T2IS-0726 |
Aorta
|
PAXgene |
1
|
6 pieces, ~8x1mm, no atherosclerosis
|
Acceptable
|
|