GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0426 |
Lung
|
PAXgene |
1
|
2 pieces 11x87 10x9 mm; Bronchopneumonia in ~40% and interstitial fibrosis in ~60%
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0526 |
Heart
|
PAXgene |
1
|
2 pieces 13x7 & 10x10 mm; no adipose
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0626 |
Stomach
|
PAXgene |
1
|
6 pieces up to 10x4.8 mm; 3 have antral (not body) mucosa with mild chronic gastritis; 3 are only muscularis
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0726 |
Fallopian tube
|
PAXgene |
0
|
2 pieces 13x4 & 9x4 mm; 1 piece has 60% fibrofatty vascularized stroma; smaller piece has 30% adipose
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0826 |
Uterus
|
PAXgene |
0
|
2 pieces 8x7 mm; all myometrium, no endometrium
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0926 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 8x3.5 mm; all have mucosa and abundant submucosal glands
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 7x4 mm; 1 has a 2.8 mm circular focus of fibrotic submucosa
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1126 |
Urinary bladder
|
PAXgene |
2
|
6 pieces up to 10x5 mm; 3 have partially sloughed epithelium; 3 have only muscular wall
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 13x6 & 10x7 mm; atrophic, fibrotic some residual lobules; ~25% adipose in 1 piece
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1326 |
Ovary
|
PAXgene |
0
|
2 pieces 10x9 & 10x8 mm; atrophic, no ova, old corpora
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1426 |
Vagina
|
PAXgene |
0
|
6 pieces up to 8x4 mm; well preserved mucosa on all pieces
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1526 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces up yo 7x3 mm; 2 have glands, 2 have no epithelium; consider it endocervix; relabel
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1626 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 9x4.5 mm; subcutaneous fat is up to 2.5 mm thick
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1726 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces up to 5x5 mm; 1 piece has both squamous and glandular mucosa; others are without epithelium
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1826 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 16x14 & 14x12 mm; aliquots are too large and have central unfixed areas. Each contains 1.5 mm blood vessels
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces up to 6x4 mm; good mucosal morphology; full thickness wall
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-2026 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 12x6 & 7x7 mm; minimal adipose
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-2126 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 6x4 & 3x3 mm; <10% adipose in larger
|
Acceptable
|
|
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-2226 |
Artery - tibial
|
PAXgene |
0
|
2 pieces: 3x2 & 1.8x1.7 mm; larger contains 2 normal arteries, 1 small vein & 40% surrounding fibrous stroma; Smaller artery has 20% stroma
|
Acceptable
|
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0126 |
Spleen
|
PAXgene |
1
|
2 pieces 12x8 & 11x8 mm;
|
Acceptable
|
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0226 |
Aorta
|
PAXgene |
1
|
6 pieces up to 10x1.5 mm; flat plaques; small intramural hemorrhage
|
Acceptable
|
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0326 |
Pancreas
|
PAXgene |
1
|
2 pieces 9x8 & 8x4 mm; over 50% external adipose tissue
|
Acceptable
|
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces 4 mm arteries with virtually no sclerosis; ~20% adherent adipose
|
Acceptable
|
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0526 |
Lung
|
PAXgene |
1
|
2 pieces 10x6 mm; patchy emphysema
|
Acceptable
|
|
GTEX-SE5C
|
41-50
|
Female
|
GTEX-SE5C-0626 |
Heart
|
PAXgene |
1
|
2 pieces 11x7 & 9x5 mm; no extraneous tissue
|
Acceptable
|
|