GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 9x8 & 13x10 mm; large ducts, no lobules; 80-90% adipose; central unfixed adipose especially in large piece
|
Acceptable
|
 |
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1426 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 7x3.8 mm; 5 pieces have up to 1.5 mm subcutaneous adipose
|
Acceptable
|
 |
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 15x13 & 13x10 mm; excessively large aliquots with large central unfixed holes
|
Acceptable
|
 |
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces 9x9 & 9x5 mm; clean except for a 1 mm nodule of fibroadipose
|
Acceptable
|
 |
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~5mm in diameter; one with 30% surrounding adipose, other 'clean' ;
|
Acceptable
|
 |
GTEX-S4P3
|
51-60
|
Female
|
GTEX-S4P3-1826 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 2 mm artery
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0126 |
Skin, leg
|
PAXgene |
0
|
6pieces, 6.5x2.5mm, squamous epithelium is ~1-3% of thickness
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0226 |
Adipose tissue
|
PAXgene |
0
|
2 aliquots, 8x6mm
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 aliquots, ~4mm d.
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0426 |
Artery - tibial
|
PAXgene |
0
|
2 aliquots, ~1.5mm d.
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 aliquots, ~7x6mm. Minimal (<5%) interstitial fat
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0626 |
Thyroid gland
|
PAXgene |
0
|
2 aliquots, ~7x6mm, diffuse lymphocytic/Hashimoto's thyroiditis with prominent regressive changes
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0726 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 aliquots, ~7x5mm. Post-menopausal TDLUs present, encricled
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~6x2mm; mucosa moderately well-preserved, ~10-15% of thickness
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-0926 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, ~6x4 mm; urothelium unusually well-preserved, ~5% of thickness
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1026 |
Ovary
|
PAXgene |
1
|
2 aliquots, ~9x6.5mm. Post-menopausal atrophic changes
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1126 |
Fallopian tube
|
PAXgene |
1
|
2 aliquots, artery, not fallopian tube. Unknown provenance.
|
Unacceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1226 |
Uterus
|
PAXgene |
1
|
2 aliquots ~8x7mm. One has remote placental implantation site scarring, encircled. No endometrial glandular or stromal tissue is evident
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1326 |
Vagina
|
PAXgene |
1
|
6 pieces, 7x2.5mm. Squamous mucosa is ~10% of thickness
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1426 |
Cervix - ectocervix
|
PAXgene |
1
|
4 aliquots, ~6x4mm. Squamous mucosa present on 2 of 4 pieces, ~5% of thickness. No dysplasia evident
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1526 |
Cervix - endocervix
|
PAXgene |
1
|
4 aliquots, ~7x4mm. All stroma, no endocervical glands noted.
|
Acceptable
|
 |
GTEX-S4UY
|
41-50
|
Female
|
GTEX-S4UY-1626 |
Stomach
|
PAXgene |
0
|
6 pieces, ~6x4mm pieces. Mucosa extremely well-preserved, ~20-30% of thickness
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0126 |
Spleen
|
PAXgene |
1
|
2 pieces 10x7 & 10x6 mm; slight congestion
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0226 |
Thyroid gland
|
PAXgene |
0
|
2 pieces 10x6 mm; 10% peripheral fibroadipose
|
Acceptable
|
 |
GTEX-S7SF
|
21-40
|
Female
|
GTEX-S7SF-0326 |
Aorta
|
PAXgene |
1
|
6 pieces up to 10x1.5 mm; no plaques
|
Acceptable
|
 |