GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces 13x6 & 11x7 mm; good preservation; focal scarring; 50% peripheral adipose in one, 40% peripheral and internal adipose in the other
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-0926 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces up to 9x2 mm; there are also 2 slightly attached pieces of muscularis propria
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces up to 10x4 mm;
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1126 |
Urinary bladder
|
PAXgene |
1
|
6 pieces up to 11x5 mm; only 1 piece has mucosa, but a very small area; the others are all muscle
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1226 |
Ovary
|
PAXgene |
0
|
2 pieces 9x8 & 7x7 mm; atrophic; lots of corpora albicans
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1326 |
Fallopian tube
|
PAXgene |
1
|
2 pieces 5x4 & 5x3 mm; good epithelium; one has 60% vessels and fibromuscular stroma
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1426 |
Uterus
|
PAXgene |
1
|
2 pieces 11x7 & 8x7 mm; one piece has proliferative endometrium; other has no glands
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1526 |
Cervix - ectocervix
|
PAXgene |
1
|
4 pieces up to 7.5x5 mm; all have squamous component; one has some cervical glands
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1626 |
Cervix - endocervix
|
PAXgene |
2
|
4 pieces up to 7x4 mm; all endocervix
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1726 |
Vagina
|
PAXgene |
1
|
6 pieces up to 10x5 mm;
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1826 |
Stomach
|
PAXgene |
2
|
7 pieces up to 8x3 mm; all have mucosa, 4 have muscularis as well
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-1926 |
Liver
|
PAXgene |
1
|
2 pieces 10x7 & 8x7 mm; large area of hemorrhage in each: 10 and 25% of specimen
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces 10x8 & 9x7 mm; atrophic; one large duct, several small ductal units; ~50% adipose content
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-2126 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 9x3 mm; up to 1.8 mm of subcutaneous adipose; trim visible fat
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-2226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 15x14 & 13x11 mm; central holes of unfixed tissue up to 5.7 mm; aliquots too large
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-2326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 12x8 & 8x8 mm; minimal adipose; tissue cracking (may be histologic)
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-2426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces 2.4x1.2 & 1.4x1.8 mm; mostly fat free
|
Acceptable
|
|
GTEX-S32W
|
51-60
|
Female
|
GTEX-S32W-2526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces 4x2 & 4x1.5 mm; no extraneous fat
|
Acceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0126 |
Adrenal glands
|
PAXgene |
1
|
2 aliquots, ~ 10x7 & 2x1mm, the smaller attached to a large nubbin of fat, ~8x5mm--LDACC ALERT
|
Acceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0226 |
Thyroid gland
|
PAXgene |
1
|
2 aliquots, ~ 9xx8mm. Microglandular adenomatoid nodule in squares; focal skeletal muscle encircled. LDACC ALERT
|
Acceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0326 |
Lung
|
PAXgene |
1
|
2 aliquots, ~ 9x6mm. Mild congestion; prominent mucoid secretions in bronchus
|
Acceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, ~ 7x4mm
|
Acceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, ~6x2mm. Squamous mucosa is ~20% of thickness
|
Acceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0626 |
Stomach
|
PAXgene |
0
|
6 pieces, ~ 10x4mm. Mucosa extremely well preserved, ~30% of thickness
|
Acceptable
|
|
GTEX-S341
|
41-50
|
Female
|
GTEX-S341-0726 |
Ovary
|
PAXgene |
0
|
2 aliquots, ~ 9x7mm. Rare residual oocytes, involuting corpus luteum
|
Acceptable
|
|