GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2726 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~5mm d. Clean specimen; interstital fat/fibrous tissue is ~15% of specimen
|
Acceptable
|
 |
GTEX-VUSG
|
51-60
|
Male
|
GTEX-VUSG-2826 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~4mm d, clean specimens, but one aliqout with adherent fibsrovascular nubbin ~4x2mm
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-0626 |
Spleen
|
PAXgene |
1
|
2 pieces ~8x7 mm
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-0726 |
Aorta
|
PAXgene |
1
|
6 pieces~10 x 1mm
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces ~9x5mm. Well preserved; one aliquot is ~20 fat on one pole. Branching non dysplastic ductal elements noted in both, ensquared. Fatty areas encircled. Islets well seen.
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-0926 |
Ovary
|
PAXgene |
1
|
2 pieces ~9x6mm. One is post menopausal cortex and medulla, the other is all medullary elements (supporting vessels/stroma), encircled
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1026 |
Vagina
|
PAXgene |
2
|
6 pieces ~8x4mm. Squamous mucosa, partly detached, <2% thickness. Minimal attached fat
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces ~9x6mm. Well-preserved, ~15% of larger aliquot is nubbins of adherent fat, ensquared.
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1226 |
Omentum
|
PAXgene |
1
|
2 pieces ~10x8mm
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1326 |
Uterus
|
PAXgene |
1
|
2 pieces ~8x8mm. All muscularis, no glands/stroma noted
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1426 |
Thyroid gland
|
PAXgene |
2
|
2 pieces ~8x7mm, focal areas of lymphocytic infiltrate c/w early Hashimoto's/lymphocytic thyroiditis. Less-well preserved than usual.
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~7x5mm.
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~5x4mm. Squamous mucosa well preserved, about ~20 total volume (fragments are enfolded)
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1726 |
Stomach
|
PAXgene |
1
|
6 pieces `~7x2mm. Mucosa variably preserved (1-2), ~30-40% of thickness
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1826 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7x3mm. Squamous epithelium is ~1-2% of thickness. ~20% of dermis contains intermingled fat, areas of extreme separation noted
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-1926 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~10x8mm. Minimal interstitial fat.
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~7x4mm, mainly muscularis, ~10 mucosa present, moderately preserved
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces ~12x8. Extreme separation. A few TDLUs noted, encircled; majority of both aliquots is fat (~85%)
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2226 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~2.5mm d. Excellent clean specimens
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4mm d. Excellent clean specimens.
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~6x5mm. Muscosa <~ 10% of thickness
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces ~10x9mm.
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2626 |
Ileum
|
PAXgene |
1
|
6 pieces ~8x3mm, <10 % muscoa, no Peyer patches, mainly muscle
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 6pieces ~9x3mm, all muscle, no muscosa
|
Acceptable
|
 |
GTEX-W5WG
|
51-60
|
Female
|
GTEX-W5WG-2826 |
Skin, suprapubic
|
PAXgene |
1
|
2 pieces ~7x3mm. Squamous epithelium is < 2-3% of thickness
|
Acceptable
|
 |