GTEX-O5YW
|
51-60
|
Male
|
GTEX-O5YW-1426 |
Colon, transverse
|
PAXgene |
1
|
3 pieces 2.6 mm thick, mucosa 0.4 mm; slight surface autolysis
|
Acceptable
|
|
GTEX-OHPJ
|
61-70
|
Male
|
GTEX-OHPJ-1826 |
Colon, transverse
|
PAXgene |
1
|
Mucosa remarkably well preserved and is ~10% of total specimen thickness
|
Acceptable
|
|
GTEX-OHPK
|
51-60
|
Female
|
GTEX-OHPK-1426 |
Colon, transverse
|
PAXgene |
2
|
loss of superficial colonic mucosa
|
Acceptable
|
|
GTEX-OHPL
|
61-70
|
Female
|
GTEX-OHPL-1426 |
Colon, transverse
|
PAXgene |
2
|
some areas better preserved than others
|
Acceptable
|
|
GTEX-OHPM
|
51-60
|
Male
|
GTEX-OHPM-1426 |
Colon, transverse
|
PAXgene |
1
|
superficial sloughing. Mucosa is ~20-23% specimen thickness
|
Acceptable
|
|
GTEX-OHPN
|
61-70
|
Female
|
GTEX-OHPN-2026 |
Colon, transverse
|
PAXgene |
3
|
Mucosa is ~15--30% of specimen thickness where present; 40-50% is sloughed
|
Acceptable
|
|
GTEX-OIZF
|
61-70
|
Male
|
GTEX-OIZF-1426 |
Colon, transverse
|
PAXgene |
1
|
Well preserved. Mucosa is 10% wall thickness
|
Acceptable
|
|
GTEX-OIZG
|
51-60
|
Male
|
GTEX-OIZG-1926 |
Colon, transverse
|
PAXgene |
1
|
1 piece with minimal mucosa; 1 with abundant mucosa
|
Acceptable
|
|
GTEX-OIZH
|
51-60
|
Male
|
GTEX-OIZH-1426 |
Colon, transverse
|
PAXgene |
1
|
Remarkably well-preserved epithelium and mucosa. Mucosal thickness ranges from 15-20% of specimen
|
Acceptable
|
|
GTEX-OIZI
|
41-50
|
Male
|
GTEX-OIZI-1726 |
Colon, transverse
|
PAXgene |
3
|
Severe mucosal autolysis; sparse mucosa
|
Acceptable
|
|
GTEX-OOBJ
|
61-70
|
Male
|
GTEX-OOBJ-1426 |
Colon, transverse
|
PAXgene |
2
|
Much of specimen also poorly fixed (adipose portions—separation and fragmenting of sections. Mucosal thickness averages 150-200 microns, ~ 10% specimen thicknesss
|
Acceptable
|
|
GTEX-OOBK
|
41-50
|
Male
|
GTEX-OOBK-1426 |
Colon, transverse
|
PAXgene |
1
|
1. 9 x 3mm pieces (3) No mucosa visible(autolyzed or not); request block rotation; r/o embedding issue
|
Acceptable
|
|
GTEX-OXRK
|
51-60
|
Female
|
GTEX-OXRK-1726 |
Colon, transverse
|
PAXgene |
1
|
Well preserved. Abundant mucosa in 2 pieces; sparse mucosa in 1
|
Acceptable
|
|
GTEX-OXRL
|
51-60
|
Male
|
GTEX-OXRL-1426 |
Colon, transverse
|
PAXgene |
2
|
2 of 3 with mucosa. 9.6x5.8mm
|
Acceptable
|
|
GTEX-OXRN
|
51-60
|
Male
|
GTEX-OXRN-2026 |
Colon, transverse
|
PAXgene |
3
|
Severely autolyzed mucosa
|
Acceptable
|
|
GTEX-OXRO
|
61-70
|
Female
|
GTEX-OXRO-0726 |
Colon, transverse
|
PAXgene |
3
|
Mucosa, 1 wall. Three pieces:
9.5x1.9mm. Moderate fracture
|
Acceptable
|
|
GTEX-OXRP
|
61-70
|
Female
|
GTEX-OXRP-2226 |
Colon, transverse
|
PAXgene |
3
|
2 pieces, 6x1mm. Epithelium with near-total autolysis
|
Acceptable
|
|
GTEX-P44G
|
21-40
|
Male
|
GTEX-P44G-2226 |
Colon, transverse
|
PAXgene |
3
|
3 pieces ave 7.5x1.5mm. Mucosa ave 15-20% of specimen thickness
|
Acceptable
|
|
GTEX-P44H
|
41-50
|
Male
|
GTEX-P44H-2126 |
Colon, transverse
|
PAXgene |
3
|
3 ~6x4mm pieces. Mucosa totally autolyzed; only a few remnant gland fragments, about 10% of specimen thickness
|
Acceptable
|
|
GTEX-P4PP
|
21-40
|
Female
|
GTEX-P4PP-1426 |
Colon, transverse
|
PAXgene |
1
|
3 ~9x2-2.5mm pieces. Mucosa well preserved, 10-15% of thickness
|
Acceptable
|
|
GTEX-P4PQ
|
51-60
|
Male
|
GTEX-P4PQ-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, none with visible mucosa
|
Acceptable
|
|
GTEX-P4QR
|
61-70
|
Male
|
GTEX-P4QR-2226 |
Colon, transverse
|
PAXgene |
3
|
6 ~7x2.5mm pieces. Epithelium totally autolyzed, stroma partially sloughed
|
Acceptable
|
|
GTEX-P4QS
|
61-70
|
Male
|
GTEX-P4QS-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces ~7x3mm. Mucosa/epithelium well-preserved, ~10% of thickness
|
Acceptable
|
|
GTEX-P4QT
|
41-50
|
Female
|
GTEX-P4QT-1426 |
Colon, transverse
|
PAXgene |
2
|
6 well-preserved pieces, ~7x2mm. Mucosa is ~20-25% thickness. Areas of under-fixation with tears
|
Acceptable
|
|
GTEX-P78B
|
41-50
|
Female
|
GTEX-P78B-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, Max 9x2mm. Tissue separation with tears
|
Acceptable
|
|