GTEX-1JMLX
|
51-60
|
Male
|
GTEX-1JMLX-0126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 5% fibrous content; central holes in 1 piece
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-0126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; 3mmx0.6mm cap of tendon [circled] on edge of 1 piece; several prominent arteries & veins in same piece
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-1026 |
Pancreas
|
PAXgene |
2
|
2 pieces; acini & islets poorly preserved; ducts in better shape
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2126 |
Omentum
|
PAXgene |
1
|
multiple fragmented pieces containing small amounts of lobulated atrophic adipose tissue in a highly vascularized stroma; there is no normal adipose tissue
|
Unacceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed, muscle intact; pericolonic fat is atrophic as in omentum
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2526 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid tissue in 3 pieces
|
Acceptable
|
 |
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece; no neural tissue in this cut
|
Acceptable
|
 |
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, some interstitial fibrosis
|
Acceptable
|
 |
GTEX-1JMQJ
|
51-60
|
Male
|
GTEX-1JMQJ-0626 |
Prostate
|
PAXgene |
2
|
2 pieces; predominantly sloughed glands embedded in fibromuscular stroma
|
Acceptable
|
 |
GTEX-1JMQJ
|
51-60
|
Male
|
GTEX-1JMQJ-1726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, some sclerotic/diabetic glomerulosclerosis
|
Acceptable
|
 |
GTEX-1JMQK
|
61-70
|
Male
|
GTEX-1JMQK-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; 1 with large eccentric fibrotic intimal plaque; small calcific intimal deposits in both pieces
|
Acceptable
|
 |
GTEX-1JMQK
|
61-70
|
Male
|
GTEX-1JMQK-0926 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 40% fibrofatty content in 1 piece
|
Acceptable
|
 |
GTEX-1JMQK
|
61-70
|
Male
|
GTEX-1JMQK-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; 10 small lymphoid nodules in autolyzed mucosa (circled) LCM
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-1526 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; tubules extensively autolyzed; glomeruli in somewhat better shape
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-1626 |
Omentum
|
PAXgene |
1
|
2 pieces; 10% fibrous content in 1 piece
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; lymphoid tissue in 4 pieces well preserved, occupies 10% to 70% area; mucosa autolyzed; LCM
|
Acceptable
|
 |
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2426 |
Mammary tissue (breast)
|
PAXgene |
2
|
2 pieces; mammary ducts, moderately autolyzed, in fibroadipose tissue in 1 piece; no ducts in other piece
|
Acceptable
|
 |
GTEX-1K2DA
|
51-60
|
Male
|
GTEX-1K2DA-0226 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; both include small attachment of fat, predominantly cortex with small portion of medulla in 1 piece
|
Acceptable
|
 |
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1326 |
Ileum
|
PAXgene |
1
|
6 pieces; only 2 small lymphoid nodules in mucosa; full thickness of wall sampled
|
Unacceptable
|
 |
GTEX-1KANC
|
51-60
|
Female
|
GTEX-1KANC-1026 |
Ovary
|
PAXgene |
1
|
2 pieces; large corpora albicantia occupy 50% are in 1 piece
|
Acceptable
|
 |
GTEX-1KANC
|
51-60
|
Female
|
GTEX-1KANC-1126 |
Uterus
|
PAXgene |
1
|
2 pieces; all myometrium in these cuts, no endometrium
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; 10% internal fat in 1 piece
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-0826 |
Aorta
|
PAXgene |
1
|
6 pieces; slight fibrous intimal thickening; adventitial hemorrhage in 4 pieces
|
Acceptable
|
 |
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece; all adenohypophysis; no neural elements in this cut
|
Acceptable
|
 |
GTEX-1KWVE
|
21-40
|
Male
|
GTEX-1KWVE-2326 |
Brain - cortex
|
PAXgene |
1
|
4 pieces; 2.5x2.5mm focus of bone and meningeal debris embedded in cortex [labeled]
|
Acceptable
|
 |