GTEX-18D9B
|
61-70
|
Male
|
GTEX-18D9B-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa with good lymphoid tissue on 3 pieces, but muscularis is on all 6; LCM
|
Unacceptable
|
 |
GTEX-18D9B
|
61-70
|
Male
|
GTEX-18D9B-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces
|
Acceptable
|
 |
GTEX-18D9B
|
61-70
|
Male
|
GTEX-18D9B-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; mucosa (autolyzed) present on all pieces along with muscularis
|
Unacceptable
|
 |
GTEX-18D9B
|
61-70
|
Male
|
GTEX-18D9B-2726 |
Testis
|
PAXgene |
1
|
2 pieces; autolysis varies from slight to moderate between the 2 pieces
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no signficant adherent dermal fat; squamous epithelium is ~70 microns
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace dermal fat (delineated); squamous epithelium is ~0 microns
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0326 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0426 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5-10% fascia/vascular elements
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0526 |
Lung
|
PAXgene |
1
|
2 pieces, moderate congestion, subacute/chronic pneumonitis/interstitial fibrosis
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% tendon insertion/fascia/adipose elements, rep delineated.
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0726 |
Adipose tissue
|
PAXgene |
0
|
1 piece + small fragment; ~10% fascia, rep delineated
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, no significant adherent fat
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-0926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, prominent nubbins of adherent fat/fibrous tissue up to ~5x2.5mm, rep delineated
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1026 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no signficant abnormalities
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1126 |
Heart
|
PAXgene |
1
|
2 pieces, minimal interstitial fibrosis/chronic ischemic changes
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, fibroadipose connective tissues, no artery present
|
Unacceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1326 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1426 |
Atrial appendage
|
PAXgene |
1
|
3 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1526 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~1mm, 30-90% of thickness
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1626 |
Pancreas
|
PAXgene |
1
|
2 pieces, Islets scarce but fairly well preserved, approaching score '2'
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, some target muscularis but mainly (~70%) fibroadipose/vascular elements.
|
Unacceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa is ~0.2-0.3mm, ~10% total thickness
|
Acceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-2026 |
Ileum
|
PAXgene |
1
|
6 pieces, correct target but insufficient target lymphoid aggregates for analysis
|
Unacceptable
|
 |
GTEX-18D9U
|
41-50
|
Male
|
GTEX-18D9U-2126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.25-0.5mm, ~25% thickness
|
Acceptable
|
 |