GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~6x1.5mm. Squamous mucosa is 10-15% thickness, well-preserved
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~7x3mm
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1226 |
Spleen
|
PAXgene |
3
|
2 pieces ~7x6mm. Poorly preserved, moderate congestion
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces ~7x3mm. All muscle, well preserved
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1426 |
Adrenal glands
|
PAXgene |
3
|
2 pieces ~9x2mm. Adherent/interstitial fat is ~40% of specimens ~3-4mm wide
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1526 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces ~7x3mm pieces. Congestion, poorly preserved tubules
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1626 |
Liver
|
PAXgene |
1
|
2 pieces ~7x6mm. Diffuse macrovesicular steatosis involves ~30% of parenchyma
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1726 |
Pancreas
|
PAXgene |
1
|
2 pieces ~9x6mm. Minimal fat, well preserved. Islets rare but visible, representative ones encircled
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1826 |
Omentum
|
PAXgene |
1
|
2 pieces ~8x6mm
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-1926 |
Ileum
|
PAXgene |
2
|
6 pieces ~5x1.5mm. Includes muscle and lymphoid aggregates, epithelium autolyzed and sloughed. ~50% of specimen are lymphocytes
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces ~8 x 1.5mm Mucosa poorly preserved; where visible ~20% of thickness
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2126 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces ~7x 1.5mm Mucosa poorly preserved, ~30% of thickness (~300 microns)
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2226 |
Prostate
|
PAXgene |
2
|
2 pieces ~7x5mm. Glandular elements poorly preserved, glandular and stromal hyperplasia is evident
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces ~8x6mm. No ductal elements noted
|
Acceptable
|
 |
GTEX-UPJH
|
51-60
|
Male
|
GTEX-UPJH-2426 |
Stomach
|
PAXgene |
1
|
6 pieces ~6x2.5mm. Mucosa variably well-poorly preserved, up to 30-40 thickness, ~700 microns
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0126 |
Spleen
|
PAXgene |
3
|
2 pieces ~ 6x5mm. Moderate congestion, poorly preserved
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces ~8x5mm, all cortex, one has adherent 1.5mm nubbin of fat, otherwise clean but not well preserved
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0326 |
Aorta
|
PAXgene |
1
|
6 pieces ~8x1.5mm. Mild patchy atherosis
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces ~3.5mm d. 50% occlusive, calcifying atherosclerosis, encircled
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0526 |
Heart
|
PAXgene |
1
|
2 pieces ?ventricle 6x6 mm, no significant ischemic changes
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces ?atrial appendage? ~6x6mm
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces ~8x6mm, interstitial fibrosis. Rare Islets seen, encircled. Fairly well preserved
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0826 |
Lung
|
PAXgene |
3
|
2 pieces ~8x5mm. Diffuse interstitial fibrosis, ? diffuse alveolar damage sequence, micro foci of acute inflammation encircled
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces ~8x4mm. Colloid nodules encircled
|
Acceptable
|
 |
GTEX-V1D1
|
51-60
|
Male
|
GTEX-V1D1-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~6x1mm, Squamous mucosa is ~40-50% thickness
|
Acceptable
|
 |