GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; ~0.25mm squamous epithelium; 2 pieces have some muscularis propria; crystals like those in stomach also in submucosa of esophagus
|
Unacceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; autolyzed mucosa grade 1 focally approaching grade 2; in submucosa scattered crystalline deposits without a reaction, resemble resins; little or no muscularis present
|
Unacceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-1926 |
Pancreas
|
PAXgene |
1
|
2 pieces; ~10 % internal fat; accentuation of periductal fibrosis; Langerhans islets present (rep outlined)
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2026 |
Uterus
|
PAXgene |
1
|
2 pieces; myometrium and foci of endometrial glands (outlined)
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2126 |
Ovary
|
PAXgene |
1
|
2 pieces; ovarian cortex with follicles, corpora lutea and corpora albicantia
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 5 to 10% internal fat
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; irregularly distributed target lymphoid aggregates (outlined) in half of the pieces; well dissectedmucosa & sumucosa
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; grade 1 to 2 autolysed colonic mucosa; irregularly distributed lymphoid aggregates; 3 of 6 samples contain muscularis (outlined)
|
Acceptable
|
 |
GTEX-1CAMS
|
21-40
|
Female
|
GTEX-1CAMS-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis and up to 1.5mm submucosa; scattered insignificant fragmented colonic glands (outlined)
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; 3 pieces well preserved, 3 have dermal edema
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0226 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated fatty tissue; low fibrous content
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0326 |
Heart
|
PAXgene |
1
|
2 pieces; extensive interstitial fibrosis and myofiber vacuolation
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0426 |
Aorta
|
PAXgene |
1
|
6 pieces; focal medial degeneration; untrimmed adventitia up to 2mm thick
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0526 |
Atrial appendage
|
PAXgene |
1
|
6 pieces; NOT atrial appendage; aorta with interstitial myxoid degeneration; no significant plaque
|
Unacceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0626 |
Lung
|
PAXgene |
1
|
2 pieces; alveolar edema & hemorrhage; delicate well preserved infrastructure
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-0926 |
Liver
|
PAXgene |
1
|
2 pieces; no fat or significant lesions
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; prominent submucosal mucous glands in 5 pieces occupying up to 25%
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; submucosal fibrovascular tissue in all, up to 3.5 mm across, 1 with submucosal glands [labeled]
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1526 |
Ovary
|
PAXgene |
1
|
2 pieces; atrophic with numerous corpora albicantia
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-1626 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; cortex with 10% fat
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 5 of 6 have mucosa as well as muscularis
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; atrophic fibrofatty tissue with rare ducts, no lobules
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-2226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed, well preserved
|
Acceptable
|
 |
GTEX-1CAV2
|
41-50
|
Female
|
GTEX-1CAV2-2326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; fat with minimal fibrous stroma
|
Acceptable
|
 |