GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces 8x6 & 7x7 mm; ~10% adipose within parenchyma (not outside)
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1726 |
Adrenal glands
|
PAXgene |
2
|
2 pieces 17x2 & 16x2 mm with about same amount of peripheral adipose along one edge
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces up to 8x4 mm; all cortex; moderate vascular congestion
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-1926 |
Kidney - medulla
|
PAXgene |
2
|
2 pieces 10x7 & 8x8 mm; both have cortex (30-40%) and medulla; moderate vascular congestion
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2026 |
Testis
|
PAXgene |
2
|
2 pieces 10x5 & 10x8 mm; spermatogenesis
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2126 |
Prostate
|
PAXgene |
3
|
2 pieces 11x5 & 9x9 mm; glands totally autolyzed in 9x9mm piece; other piece is fibromuscular (both smooth and striated muscle (peripheral to prostatic parenchyma)
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2226 |
Urinary bladder
|
PAXgene |
3
|
6 pieces up to 8x3 mm; epithelium sloughed; one piece 80% adipose
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces up to 8x2 mm; mucosa largely autolyzed
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2426 |
Stomach
|
PAXgene |
2
|
6 pieces up to 8x3 mm; only deep mucosa has intact glands
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2526 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces up to 5x5 mm;
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2626 |
Brain - cortex
|
PAXgene |
2
|
4 pieces up to 5x5 mm;
|
Acceptable
|
|
GTEX-T6MN
|
51-60
|
Male
|
GTEX-T6MN-2726 |
Pituitary gland
|
PAXgene |
2
|
2 pieces: 6x4 mm with good parenchyma; 6x1.7 is largely fibrous tissue
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~7.5x3mm. Squamous epithelium is ~2-3% of thickness.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0226 |
Adipose tissue
|
PAXgene |
0
|
2pieces, ~7x6mm. Mixed fibrous-adipose tissues.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~12x10mm. ~40-50% interstitial fat, mildly atrophic-appearing skeletal muscle fibers.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4.5mm d. Good clean specimens, minimal fat.
|
Acceptable
|
|
GTEX-TMKS
|
51-60
|
Male
|
GTEX-TMKS-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~2.5mm d. Marked circumferential calcification, pattern suggests calcified atherosclerotic deposits rather than Monckeberg's medial sclerosis.
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces up to 7x3 mm; 0.5 mm subcutaneous adipose on three pieces
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces 9x5 & 7x6 mm; ~30% fibrous tissue in 1 and ~10% nerves & artery in other; no artifacts
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces 6x4 & 6x4 mm; ~10% adipose at periphery of each
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces 2x1.5 mm each; small vein at edge of one
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces 9x4 & 7x5 mm; <10% internal adipose
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 9x7 & 7x6 mm; small foci of lymphoid cells
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0726 |
Lung
|
PAXgene |
1
|
2 pieces 9x7 & 8x7 mm; moderate alveolar hemorrhages; moderate interstitial fibrosis; no pneumonia or heart failure cells
|
Acceptable
|
|
GTEX-TSE9
|
51-60
|
Female
|
GTEX-TSE9-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 3.7 & 3 mm arteries with extensive calcified atheromatous eccentric plaques occluding ~ 75% of the lumens; ~10% peripheral adipose
|
Acceptable
|
|