GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1426 |
Brain - cortex
|
PAXgene |
2
|
3 ~7x3 mm aliquots; 1 ~4x1.5mm aliquot; 1 ~3.5x3.5mm fragment of dura
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1526 |
Thyroid gland
|
PAXgene |
2
|
2 ~8x7mm aliquots. Suspect malignancy, ?follicular variant of papillary carcinoma, pending glass review. Autolysis hampers analysis
|
Unacceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1626 |
Skin, leg
|
PAXgene |
1
|
6 ~9x1.5mm pieces. Squamous epithelium is ~2-3% of thickness
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1726 |
Artery - tibial
|
PAXgene |
1
|
2 ~5mm d aliquots—good clean specimens
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 11x9mm aliquots. Atrophic mammary ductal and lobular elements noted.
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-1926 |
Heart
|
PAXgene |
1
|
2 ~10x10mm aliquots, one ~25% attached adipose pericardial fat (10x5mm)
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2026 |
Coronary artery
|
PAXgene |
1
|
2 ~3x0.5mm aliquots, each with 0.5-1mm layer of fat, to much adherent fat
|
Unacceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2126 |
Stomach
|
PAXgene |
3
|
6 ~8.5x2mm pieces; mucosa nearly totally autolyzed
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2226 |
Kidney - medulla
|
PAXgene |
3
|
2 ~10x9mm aliquots. Tubules badly autolyzed
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2326 |
Kidney - cortex
|
PAXgene |
3
|
6 ~8x3.5mm pieces, marked tubular autolysis
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2426 |
Colon, transverse
|
PAXgene |
3
|
6 ~8x2mm pieces. Mucosa totally autolyzed, many have adherent fat/fibrovascular tissue fragments
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2526 |
Vagina
|
PAXgene |
1
|
6 ~9x4.5mm pieces. Squamous mucosa is ~3-5% of thickness
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2626 |
Urinary bladder
|
PAXgene |
3
|
8 ~7.5x2.5mm pieces. Urothelium completely sloughed
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2726 |
Cervix - ectocervix
|
PAXgene |
2
|
4 ~7x5mm aliquots, few minute foci of squamous mucosa present
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2826 |
Cervix - endocervix
|
PAXgene |
2
|
4 ~6x4mm aliquots. No visible/viable mucosa
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-2926 |
Uterus
|
PAXgene |
3
|
2 ~9x8mm aliquots. No viable endometrium; completely autolyzed focus along edge of one aliquot
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-3026 |
Fallopian tube
|
PAXgene |
3
|
2 ~5x4mm aliquots, luminal mucosa totally autolyzed
|
Acceptable
|
|
GTEX-QVJO
|
61-70
|
Female
|
GTEX-QVJO-3126 |
Ovary
|
PAXgene |
1
|
2 ~10x8mm aliquots. Post menopausal atrophic cortex, corpora albicantia noted
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0126 |
Adipose tissue
|
PAXgene |
1
|
2 ~ 11x8mm aliquots
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0226 |
Muscle, skeletal
|
PAXgene |
1
|
2 ~ 8x8mm aliquots, fragmented, one with 5x1.5mm central fatty area
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 ~ 10x8mm pieces. Ductal & lobular elements noted, early epithelial sloughing noted
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0426 |
Aorta
|
PAXgene |
1
|
6 ~ 8.5x1mm 10.5x8.5 pieces
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0526 |
Liver
|
PAXgene |
2
|
2 ~ 9x7mm aliquots
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 ~ 5x1.5mm pieces; squamous mucosa is 10-20% of thickness
|
Acceptable
|
|
GTEX-QVUS
|
61-70
|
Female
|
GTEX-QVUS-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 ~ 5.5x3mm pieces
|
Acceptable
|
|