GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.3mm, but with advanced autolysis, loss of glandular elements
|
Acceptable
|
|
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2526 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.2mm
|
Acceptable
|
|
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces prominent fibrocystic changes/adenosis, rep delineated
|
Acceptable
|
|
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2726 |
Pituitary gland
|
PAXgene |
1
|
1 piece, adenohypophysis; trace dura (delineated)
|
Acceptable
|
|
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2826 |
Brain - cortex
|
PAXgene |
1
|
5 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2926 |
Brain - cerebellum
|
PAXgene |
1
|
5 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0126 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; skeletal muscle, trivila fat component
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0226 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; atherosclerosis
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0326 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 1 with trivial attachment of fat, 2nd has at least 20% mostly internal fat (incomplete section)
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; central defects, mature fat with 5 and 40% fibrocollagenous tissue/tendon/vessels/nerve
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0526 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well trimmed, epidermis measures 37 microns
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0626 |
Testis
|
PAXgene |
1
|
2 pieces; atrophy with hyalinized tubules, increased Leydig cells
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0726 |
Prostate
|
PAXgene |
2
|
2 pieces; nodular hyperplasia
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0826 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; mild lymphocytic thyroiditis with 1mm Hurthle cell lesion
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0926 |
Aorta
|
PAXgene |
1
|
6 pieces; severe atherosclerosis, collection of lymphocytes within adventitia, two pieces show defects within the wall (? secondary to processing)
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1026 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1 includes up to 15% fat
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; large cuff of adipose tissue (up to 2.2mm), obliterated by plaque
|
Unacceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1226 |
Heart
|
PAXgene |
1
|
2 pieces; interstitial fibrosis
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1326 |
Lung
|
PAXgene |
1
|
2 pieces; congestion, edema, 1 piece includes portion of pleura (not target), some fibrosis
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1426 |
Liver
|
PAXgene |
2
|
2 pieces; includes portion of capsule (not target), central congestion
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1526 |
Pancreas
|
PAXgene |
2
|
2 pieces; includes ~10% fat and larger vessel, interstitial fibrosis
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, few with small attachment of fat
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis with some residual adventitia
|
Acceptable
|
|
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; pseudodiverticulosis, several clusters of submucosal glands
|
Acceptable
|
|