GTEx Histological Images
Displaying 25 of 953 results.
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| Case ID | Age | Gender | Specimen ID | Tissue Type | Fixative | Autolysis | Pathology Review Comments | Acceptability | Action |
| GTEX-1QEPI | 61-70 | Female | GTEX-1QEPI-1826 | Esophagus - mucosa | PAXgene | 1 | 6 pieces; moderate sloughing of squamous epithelium; well dissected | Acceptable |  |
| GTEX-1QL29 | 41-50 | Male | GTEX-1QL29-1626 | Esophagus - mucosa | PAXgene | 1 | 6 pieces, squamous mucosa up to ~0.35mm, 10-20% of thickness | Acceptable | |
| GTEX-1QMI2 | 61-70 | Male | GTEX-1QMI2-2226 | Esophagus - mucosa | PAXgene | 1 | 6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness | Acceptable | |
| GTEX-1QP28 | 51-60 | Female | GTEX-1QP28-1826 | Esophagus - mucosa | PAXgene | 1 | 6 pieces, squamous mucosa is ~0.2mm, ~10% of thickness, prominent submucosal mucus gland present, rep delineated | Acceptable | |
| GTEX-1QP29 | 51-60 | Male | GTEX-1QP29-2126 | Esophagus - mucosa | PAXgene | 1 | 6 pieces; only focal superficial desquamation; stratified squamous epithelium measures ~ 0.2mm in thickness; submucosal glands (outlined) and dystrophic calcifications (arrows) | Acceptable | |
| GTEX-1QP2A | 51-60 | Male | GTEX-1QP2A-1926 | Esophagus - mucosa | PAXgene | 0 | 6 pieces; 1 piece has dilated submucosal ducts with inspissated material | Acceptable | |
| GTEX-1QP66 | 51-60 | Male | GTEX-1QP66-0426 | Esophagus - mucosa | PAXgene | 1 | 6 pieces;congested fibrovascular tissue, nerves and fat; target mucosa not present | Unacceptable | |
| GTEX-1QP67 | 41-50 | Female | GTEX-1QP67-0726 | Esophagus - mucosa | PAXgene | 1 | 6 pieces, squamous mucosa up to ~0.4mm, ~20% thickness; submucosal mucus glands numerous, rep encircled | Acceptable | |
| GTEX-1QP6S | 41-50 | Male | GTEX-1QP6S-2226 | Esophagus - mucosa | PAXgene | 2 | 6 pieces; only remnants of autolyzed mucosa (arrows) and preserved muscularis mucosa | Acceptable | |
| GTEX-1QP9N | 21-40 | Male | GTEX-1QP9N-0326 | Esophagus - mucosa | PAXgene | 1 | 6 pieces; 3 pieces have no mucosa, only muscularis propria, but with >90% striated muscle, not smooth muscle; 3 smaller pieces are largely fibrofatty | Unacceptable | |
| GTEX-1QP9N | 21-40 | Male | GTEX-1QP9N-0926 | Esophagus - mucosa | PAXgene | 0 | 6 pieces; esophagus mucosa, not muscularis; all have prominent submucosal glands occupying 10% | Acceptable | |
| GTEX-1QPFJ | 21-40 | Female | GTEX-1QPFJ-1226 | Esophagus - mucosa | PAXgene | 1 | 4 pieces; slight sloughing of surface on 2 pieces; slightly edematous stroma; abundant submucosal fibrous stroma, without glands | Acceptable | |
| GTEX-1QW4Y | 21-40 | Male | GTEX-1QW4Y-0526 | Esophagus - mucosa | PAXgene | 2 | 6 pieces target squamous mucosa is partly sloughing, ~0.2mm, ~5-10% thickness. Chronic lymphoid aggregates in lamina propria. Switch with -0425 | Acceptable | |
| GTEX-1R46S | 61-70 | Female | GTEX-1R46S-2126 | Esophagus - mucosa | PAXgene | 2 | 6 pieces, target squamous mucosa poorly preserved, sloughing, up to ~0.1mm, ~5-10% thickness | Acceptable | |
| GTEX-1R7EU | 61-70 | Male | GTEX-1R7EU-0826 | Esophagus - mucosa | PAXgene | 1 | 6 pieces; focal desquamation of the surface; ~0.3mm thick squamous epithelium; submucosa with focal lymphoid aggregates (arrows); submucosal gland (outlined) | Acceptable | |
| GTEX-1R7EV | 41-50 | Male | GTEX-1R7EV-0626 | Esophagus - mucosa | PAXgene | 1 | 6 pieces; target mucosa not present; well trimmed muscularis | Unacceptable | |
| GTEX-1R9JW | 21-40 | Female | GTEX-1R9JW-1526 | Esophagus - mucosa | PAXgene | 1 | 6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness | Acceptable | |
| GTEX-1R9K4 | 61-70 | Male | GTEX-1R9K4-1926 | Esophagus - mucosa | PAXgene | 1 | 6 pieces; stratified squamous epithelium ~0.5mm thick; submucosal glands (outlined) | Acceptable | |
| GTEX-1R9K5 | 51-60 | Male | GTEX-1R9K5-1526 | Esophagus - mucosa | PAXgene | 1 | 4 pieces, squamous mucosa up to ~0.4mm, ~30% thickness | Acceptable | |
| GTEX-1R9PM | 21-40 | Male | GTEX-1R9PM-0926 | Esophagus - mucosa | PAXgene | 1 | 6 pieces, squamous mucosa up to ~0.4mm, ~10-20% thickness. Few submucosal mucus glands present, rep encircled | Acceptable | |
| GTEX-1R9PN | 41-50 | Female | GTEX-1R9PN-0926 | Esophagus - mucosa | PAXgene | 1 | 5 pieces; 2 with prominent submucosal glands [10%][arrowed] | Acceptable | |
| GTEX-1R9PO | 61-70 | Female | GTEX-1R9PO-1326 | Esophagus - mucosa | PAXgene | 2 | 6 pieces; generalized desquamation of 2/3 of stratified squamous epithelium; submucosal glands (outlined) | Acceptable | |
| GTEX-1RAZA | 21-40 | Male | GTEX-1RAZA-1326 | Esophagus - mucosa | PAXgene | 1 | 6 pieces; focal superficial desquamation of stratified squamous epithelium; ~0.4mm thick epithelium; submucosal glands (outlined) | Acceptable | |
| GTEX-1RAZQ | 21-40 | Male | GTEX-1RAZQ-1726 | Esophagus - mucosa | PAXgene | 1 | 5 pieces, Squamous mucosa is ~0.4mm, ~25-30% thickness approaching score 2, surface sloughing. | Acceptable | |
| GTEX-1RAZR | 41-50 | Male | GTEX-1RAZR-1226 | Esophagus - mucosa | PAXgene | 0 | 6 pieces; moderately hyperplastic squamous epithelium with chronic inflammation in lamina propria and squamous metaplasia of glandular ducts [circled]; a few submucosal glands [arrowed] | Acceptable | |