GTEX-1RDX4
|
51-60
|
Female
|
GTEX-1RDX4-1826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; 3 with full mucosa, 3 with minimal mucosa; muscle better preserved; full muscle on 5, scraps on 1
|
Acceptable
|
|
GTEX-1RMOY
|
51-60
|
Male
|
GTEX-1RMOY-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; target muscularis (outlined); 3 pieces with colonic mucosa (arrows)
|
Acceptable
|
|
GTEX-1RNSC
|
61-70
|
Male
|
GTEX-1RNSC-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.2mm, advanced autolysis with vesitigal lamina propria only
|
Acceptable
|
|
GTEX-1RNTQ
|
21-40
|
Female
|
GTEX-1RNTQ-1926 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderate to severe autolysis of colonic mucosa; preserved muscularis
|
Acceptable
|
|
GTEX-1RQED
|
61-70
|
Male
|
GTEX-1RQED-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.25mm, advanced autolysis, glandular elements sloughed, lamina propria remnants present
|
Acceptable
|
|
GTEX-1S3DN
|
41-50
|
Male
|
GTEX-1S3DN-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.3mm, advanced autolysis
|
Acceptable
|
|
GTEX-1S5VW
|
61-70
|
Male
|
GTEX-1S5VW-2926 |
Colon, transverse
|
PAXgene |
3
|
4 pieces, mucosa up to ~0.6mm, glandular mucosa autolyzed, mainly lamina propria
|
Acceptable
|
|
GTEX-1S5ZA
|
21-40
|
Male
|
GTEX-1S5ZA-1526 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~0.4mm, ~10% thickness
|
Acceptable
|
|
GTEX-1S5ZU
|
21-40
|
Female
|
GTEX-1S5ZU-2226 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa autolyzed on all; muscularis intact
|
Acceptable
|
|
GTEX-1S82P
|
61-70
|
Female
|
GTEX-1S82P-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mildly autolyzed mucosa and submucosa; muscularis not included
|
Acceptable
|
|
GTEX-1S82U
|
21-40
|
Female
|
GTEX-1S82U-0726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa well preserved, up to ~0.5mm, ~10% of thickness in 4/6 sections
|
Acceptable
|
|
GTEX-1S82Z
|
21-40
|
Female
|
GTEX-1S82Z-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, fragmented, target mucosa up to ~0.5mm
|
Acceptable
|
|
GTEX-1S831
|
21-40
|
Male
|
GTEX-1S831-1626 |
Colon, transverse
|
PAXgene |
1
|
7 pieces; mild to moderate autolysis;
|
Acceptable
|
|
GTEX-1S83E
|
41-50
|
Male
|
GTEX-1S83E-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mild to moderate mucosal autolysis; muscularis preserved
|
Acceptable
|
|
GTEX-N7MS
|
61-70
|
Male
|
GTEX-N7MS-2025 |
Colon, transverse
|
PAXgene |
3
|
extensive autolysis in mucosa
|
Acceptable
|
|
GTEX-N7MT
|
61-70
|
Female
|
GTEX-N7MT-0626 |
Colon, transverse
|
PAXgene |
2
|
3 pieces 12x3.5 mm;
|
Acceptable
|
|
GTEX-NFK9
|
41-50
|
Male
|
GTEX-NFK9-2026 |
Colon, transverse
|
PAXgene |
1
|
remarkably well preserved; minimal superficial autolysis
|
Acceptable
|
|
GTEX-NL3G
|
61-70
|
Female
|
GTEX-NL3G-2726 |
Colon, transverse
|
PAXgene |
3
|
Mucosa completely autolytic; only viable tissue is muscularis propria and adipose
|
Acceptable
|
|
GTEX-NL3H
|
51-60
|
Male
|
GTEX-NL3H-2426 |
Colon, transverse
|
PAXgene |
3
|
Glands 100% autolyzed; remainder slightly autolyzed
|
Acceptable
|
|
GTEX-NL4W
|
51-60
|
Male
|
GTEX-NL4W-2326 |
Colon, transverse
|
PAXgene |
3
|
Glands ~90% autolyzed
|
Acceptable
|
|
GTEX-NPJ7
|
61-70
|
Female
|
GTEX-NPJ7-0926 |
Colon, transverse
|
PAXgene |
3
|
Epithelial autolysis ~100% (“score 3”)
|
Acceptable
|
|
GTEX-NPJ8
|
21-40
|
Male
|
GTEX-NPJ8-1026 |
Colon, transverse
|
PAXgene |
3
|
Epithelium badly autolyzed
|
Acceptable
|
|
GTEX-O5YT
|
21-40
|
Male
|
GTEX-O5YT-1426 |
Colon, transverse
|
PAXgene |
1
|
sloughed mucosa in 1 of 3 pieces
|
Acceptable
|
|
GTEX-O5YU
|
51-60
|
Male
|
GTEX-O5YU-2026 |
Colon, transverse
|
PAXgene |
2
|
considerable glandular autolysis
|
Acceptable
|
|
GTEX-O5YV
|
61-70
|
Female
|
GTEX-O5YV-1726 |
Colon, transverse
|
PAXgene |
3
|
3 total glandular autolysis
|
Acceptable
|
|