NIH, National Cancer Institute, Division of Cancer Treatment and Diagnosis (DCTD) NIH - National Institutes of Health National Cancer Institute DCTD - Division of Cancer Treatment and Diagnosis

GTEx Histological Images

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Case ID Age Gender Specimen ID Tissue Type Fixative Autolysis Pathology Review Comments Acceptability Action
GTEX-144GM 21-40 Male GTEX-144GM-1826 Skin, leg PAXgene 0 6 pieces, no dermal fat, squamous epithelium is ~50 microns Acceptable View Image
GTEX-144GM 21-40 Male GTEX-144GM-1926 Adipose tissue PAXgene 0 2 pieces, ~10% vascular/connective tissue, delineated Acceptable View Image
GTEX-144GM 21-40 Male GTEX-144GM-2026 Muscle, skeletal PAXgene 0 2 pieces, trace interstitial fat Acceptable View Image
GTEX-144GM 21-40 Male GTEX-144GM-2126 Nerve - tibial PAXgene 0 2 pieces, excellent clean specimen Acceptable View Image
GTEX-144GM 21-40 Male GTEX-144GM-2226 Artery - tibial PAXgene 0 2 pieces, excellent clean specimen Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0126 Spleen PAXgene 1 2 pieces; moderate congestion Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0226 Adrenal glands PAXgene 1 2 pieces; 40% external fat Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0326 Kidney - cortex PAXgene 1 6 pieces; no lesions; medulla in 2 small fragments [annotated] Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0426 Thyroid gland PAXgene 1 2 pieces; 2.5mm centyral focus of skeletal muscle [annotated] Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0526 Aorta PAXgene 1 6 pieces; 3 of 6 have untrimmed adventitia up to 0.5mm thick Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0626 Heart PAXgene 1 2 pieces; enlarged nuclei; few small patchy fibrous foci Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0726 Atrial appendage PAXgene 1 2 pieces; 40% external fat on 1; muscle resembles ventricular myocardium rather than atrial Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0826 Coronary artery PAXgene 1 2 pieces; 1 is 60% fat, 40 % myocardium, no artery; other has 2 small arteries (1mm & 0.7mm) and 90% fat. LCM Unacceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-0926 Lung PAXgene 1 2 pieces; fibrosis, emphysema, pigmented macrophages Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1026 Esophagus - mucosa PAXgene 1 6 pieces; prominent submucosal mucous glands in 4 pieces up to 10% area [annotated] Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1126 Esophagus - muscularis PAXgene 1 6 pieces; well trimmed except for submucosal glands in 1 piece (5%) [annotated] Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1226 Gastroesophageal junction PAXgene 1 6 pieces; all are gastric mucosa only Unacceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1326 Stomach PAXgene 1 6 pieces; 4 have full thickness wall, 2 are without muscularis Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1426 Pancreas PAXgene 1 2 pieces; multiple foci of fibrosis (probable healed pancreatitis); 30% external fat on 1, 20% on other Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1526 Skin, suprapubic PAXgene 1 6 pieces; 3 have deep pockets of fat up to 1.3mm across Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1626 Ileum PAXgene 1 6 pieces; 5 have abundant mucosal lymphoid tissue, but 5 have muscularis (not target). LCM Unacceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1726 Colon, transverse PAXgene 1 6 pieces; 2 lack muscularis LCM Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1826 Colon, sigmoid PAXgene 1 6 pieces; 3 have mucosa (not target) as well as muscularis. LCM Unacceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-1926 Mammary tissue (breast) PAXgene 1 2 pieces; fibrofatty tissue without mammary ducts Acceptable View Image
GTEX-145MN 21-40 Male GTEX-145MN-2026 Minor salivary glands PAXgene 1 2 pieces; salivary glands in both but comprise only 30% & 5% of samples, remainder is skin and muscle. LCM Unacceptable View Image