GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces;10% and 5% external fat; moderately autolyzed cortex
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; diffuse, severe pyelonephritis with abscess formation (arrow); glomeruli suggestive of membranous process (rep outlined)
|
Unacceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2026 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; congestion, focal hemorrhage & edema [arrows]; fascia or tendon on edges [labeled]
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2126 |
Stomach
|
PAXgene |
2
|
6 pieces; poor mucosal preservation; muscle intact
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2226 |
Prostate
|
PAXgene |
1
|
2 pieces; mainly fibromuscular stroma with one focus of glandular component (outlined)
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, well trimmed
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; severely autolyzed mucosa and preserved muscularis
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2526 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa and too dispersed lymphoid aggregates to warrant further analysis; LCM
|
Unacceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; essentially well trimmed except one poice containing ~10% external fat (outlined)
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2726 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present;
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2826 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-2926 |
Brain - cortex
|
PAXgene |
1
|
4 fragmenetd pieces; mild to moderate autolysis
|
Acceptable
|
 |
GTEX-17MF6
|
41-50
|
Male
|
GTEX-17MF6-3026 |
Pituitary gland
|
PAXgene |
1
|
1 piece; mostly adenohypophysis; neurohypophysis outlined
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces, sections of artery, unknown provenance, no pancreas
|
Unacceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, skeletal muscle, unknown provenance, no thyroid identified, not GTEx target
|
Unacceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0426 |
Stomach
|
PAXgene |
1
|
6 pieces, muscularis only, no mucosa
|
Unacceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.5mm, 10-25% thickness
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, squamous mucosa/stroma, no target muscularis, not GTEx target
|
Unacceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0826 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis is present
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-0926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements only, mild gynecomastoid stromal hyperplasia
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, abundant lymphoid aggregates (rep delineated) are 50-60% of tissue
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-1126 |
Omentum
|
PAXgene |
1
|
2 pieces, minimal fascia
|
Acceptable
|
 |
GTEX-17MFQ
|
21-40
|
Male
|
GTEX-17MFQ-1226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, ~35% stroma & trace mucosa, delineated
|
Acceptable
|
 |