GTEX-17HII
|
51-60
|
Male
|
GTEX-17HII-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-17HII
|
51-60
|
Male
|
GTEX-17HII-2726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa is ~0.35mm, ~25% thickness, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-17HII
|
51-60
|
Male
|
GTEX-17HII-2826 |
Ileum
|
PAXgene |
2
|
4 pieces,glandular elements autolyzed; target lymphoid aggregates are ~20-30% of tissue; rep delineated
|
Acceptable
|
 |
GTEX-17HII
|
51-60
|
Male
|
GTEX-17HII-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17HII
|
51-60
|
Male
|
GTEX-17HII-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17HII
|
51-60
|
Male
|
GTEX-17HII-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece, all adenohypophysis
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0126 |
Prostate
|
PAXgene |
1
|
2 pieces, hyerplasia, several 1-2 mm microfoci of Adenocarcinoma, 3+3=6, ensquared
|
Unacceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0226 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, cortex, ~10% adherent fat/vascular elements, delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0426 |
Omentum
|
PAXgene |
1
|
2 pieces, ~15-20% fascia/vascular elements, rep delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0526 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis, adherent fascia/fat up to ~1mm
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, adherent fat is ~20% total specimen, delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0726 |
Coronary artery
|
PAXgene |
1
|
2 pieces, correct target but abundant adherent fat/myocardium(delineated) are ~80% of specimen
|
Unacceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0826 |
Heart
|
PAXgene |
1
|
2 pieces, minimal mild ischemic changes/interstitial fibrosis
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0926 |
Lung
|
PAXgene |
1
|
2 pieces diffuse chronic congestion/edema, moderate-marked
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1026 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities, ~2mm nubbin of fat on one edge, delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1126 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.2-0.3mm, ~20-50% thickness. Submucosal mucus glands present, rep. delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, ~50% squamous mucosa, rest is stroma/mucus glands. <10% target muscularis present
|
Unacceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1526 |
Stomach
|
PAXgene |
1
|
6 pieces, superficial mucosa approached score '2', up to ~0.7mm, ~15% thickness. Chronic gastritis, microglandular cystic change noted
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1626 |
Ileum
|
PAXgene |
2
|
6 pieces, few lymphoid glandular aggregates, delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa well-preserved, ).35mm, ~10% total thickness
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, ~5-10% 'contaminant mucosa, rep. delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1926 |
Pancreas
|
PAXgene |
1
|
2 pieces, Islets infrequent but fairly well preserved; rep encircled. Few foci are approaching more moderate saponification
|
Acceptable
|
 |