GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1826 |
Cervix - ectocervix
|
PAXgene |
1
|
4 ~11x4.5mm aliquots. Mainly squamous, focal glandular mucosa (transition zone), ~5-8% of thickness
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-1926 |
Cervix - endocervix
|
PAXgene |
1
|
4 ~10x3.4mm aliquots. Mixed endo & ectocervical mucosa (trace amounts)
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-2026 |
Vagina
|
PAXgene |
0
|
6 ~6x2.5mm pieces; squamous mucosa is ~10 thickness/ r/o dysplasia on glass
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-2126 |
Skin, leg
|
PAXgene |
1
|
6 ~6x2.5mm pieces. Squamous epithelium is ~1.5-2% of thickness (~40-50 microns)
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-2226 |
Adipose tissue
|
PAXgene |
1
|
2 ~11x9mm aliquots. Large areas of central under-fixation with holes/tears
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-2326 |
Muscle, skeletal
|
PAXgene |
0
|
2 ~10x6mm aliquots, ~ 20% interstitial fat. Focal areas of scarring
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-2426 |
Artery - tibial
|
PAXgene |
0
|
2 ~ 1.5d aliquots, good clean specimens
|
Acceptable
|
|
GTEX-PWOO
|
41-50
|
Female
|
GTEX-PWOO-2526 |
Nerve - tibial
|
PAXgene |
0
|
2 ~ 5.5x3.5mm aliquots, clean specimens
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, up to 7.5x2.5 mm; scattered dermal fractures
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0226 |
Adipose tissue
|
PAXgene |
0
|
3 pieces, up to 10x7 mm; some central defects
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0326 |
Heart
|
PAXgene |
1
|
2 pieces, about 9mm squared; a 2 mm coronary artery is at 1 edge embedded in <5% fat
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0426 |
Aorta
|
PAXgene |
0
|
6 pieces, ~9x1.5 mm
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0526 |
Lung
|
PAXgene |
1
|
2 pieces, up to 12x6 mm
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, ~6x2 mm, 3 have glandular mucosa in part or total; one shows intestinal metaplasia; several, squamous hyperplasia of reflux type
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to ~9x3 mm; 1 has small <1mm of squamous mucosa
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0826 |
Liver
|
PAXgene |
1
|
2 pieces,~ 6x8 mm; central sinusoidal dilatation; focal fragmentation
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-0926 |
Spleen
|
PAXgene |
1
|
2 pieces, ~6 mm cubed; moderate congestion
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces, 7x7 & 10x4 mm; very good exo and endocrine glands and ducts; <5% fat;
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, ~7x2 mm; ~10% adipose; very small medulla
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~6x4 mm; only 2 have abundant mucosa
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1526 |
Stomach
|
PAXgene |
1
|
6 pieces, ~10x4 mm; very good and abundant mucosa up to 1 mm thick
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, ~8.5x5 mm; focal fragmentation
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, up to 1.8x1.3 mm; 1 with 50% fat; 1 with 10% fat
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 5.5x2 mm 2 veins and 1 artery& 3x2 mm 2 arteries & 1 vein; up to 30% adipose
|
Acceptable
|
|
GTEX-PX3G
|
21-40
|
Female
|
GTEX-PX3G-1926 |
Urinary bladder
|
PAXgene |
1
|
4 pieces, up 8x4.5 mm; extensive patchy surface sloughing
|
Acceptable
|
|