GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-0726 |
Aorta
|
PAXgene |
1
|
2 pieces, atherosis up to ~0.7mm
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-0826 |
Heart
|
PAXgene |
1
|
2 pieces, moderate interstitial fibrosis/chronic ischemic changes
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-0926 |
Lung
|
PAXgene |
1
|
2 pieces, marked edema and congestion, evidence of chronicity
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1026 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, goitre with regressive changes
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1226 |
Omentum
|
PAXgene |
1
|
2 pieces, ~10% fascia/vascular elements
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis.
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.35mm, ~10-15% thickness.
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1526 |
Liver
|
PAXgene |
1
|
2 pieces, macro and microvesicular steatosis involves ~50% of parenchyma. Mild passive congestion
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponification, islets not visible. ~50% parenchyma (delineated), ~50% adherent/interstitial fat
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1726 |
Spleen
|
PAXgene |
2
|
2 pieces, marked congestion
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1826 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, ~90% fat, 10% autolyzed cortex
|
Unacceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1926 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present, tubules with advanced autolysis
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2026 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular component with advanced autolysis, hyperplastic glandular and stromal pattern
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2126 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis is present but appears reduced
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2226 |
Skin, suprapubic
|
PAXgene |
0
|
2 pieces, trace adherent and minimal intra-dermal fat, rep delineated. Squamous epithelium is ~30-40 microns
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, mainly fibroadipose elements. Trace ductal elements encircled
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa with sloughed mucosal ductal elements, residual lamina propria is ~0.1mm
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa with advance autolysis, devoid of lymphoid aggregates
|
Unacceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2626 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~0.5mm, advanced autolysis, sloughed on 3/6 pieces
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, trace autolyzed 'contaminant' mucosa present
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2826 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, glandular parenchyma is ~95% of specimen, trace adherent fibrous nubbin up to 0.2mm
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2926 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
|