GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2326 |
Fallopian tube
|
PAXgene |
3
|
2 aliquots, ~5x3.5mm. Lining epithelium badly autolyzed
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2426 |
Vagina
|
PAXgene |
1
|
6 pieces, ~6x2.5mm. One aliquot has trace squamous mucosa, rest completely sloughed
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2526 |
Urinary bladder
|
PAXgene |
3
|
6 pieces, ~6x2.5mm, urothelium totally sloughed
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2626 |
Uterus
|
PAXgene |
2
|
2 aliquots, ~6x6mm. Endometrial glands/stroma are ~10% of thickness, glands poorly preserved
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2726 |
Cervix - ectocervix
|
PAXgene |
1
|
4 pieces, ~4x4mm. 2 have atrophic squamous mucosa, <<1% of thickness
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2826 |
Cervix - endocervix
|
PAXgene |
1
|
4 pieces, ~5x4mm. Only one aliquot has minute endocervical glands
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-2926 |
Brain - cerebellum
|
PAXgene |
2
|
4pieces, ~5x4mm. Granular layer more autolyzed
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, ~5x5mm
|
Acceptable
|
|
GTEX-RU72
|
51-60
|
Female
|
GTEX-RU72-3126 |
Pituitary gland
|
PAXgene |
2
|
1 8.5x6mm aliquot
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0126 |
Spleen
|
PAXgene |
1
|
2 aliquots, ~10x6mm. Better preserved than usual, mild red pulp congestion
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0226 |
Adrenal glands
|
PAXgene |
1
|
2 aliquots, ~10x7mm. All cortex. Unusually well-preserved
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, ~9x2mm. Several with layer of atherosis, up to 0.5mm in areas
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0426 |
Coronary artery
|
PAXgene |
1
|
4 pieces ~2.5mm d. Several with ~0.5mm discontinuous adherent fat; several with ~20% atherosclerotic narrowing
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0526 |
Heart
|
PAXgene |
1
|
2 aliquots, ~10x5mm. Mild ischemic changes, focal contraction banding noted
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0626 |
Lung
|
PAXgene |
1
|
2 aliquots, ~9x6mm. Minimal congestion/edema
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0726 |
Pancreas
|
PAXgene |
1
|
2 aliquots, ~9x6mm. Both with ~50% parenchyma, rest is intermingled/peripheral fat. Well preserved.
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces, ~7x3mm. Squamous mucosa well preserved, ~5-10% of thickness
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-0926 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces, ~7x4mm
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1026 |
Thyroid gland
|
PAXgene |
1
|
2 aliquots, ~1.5x7.5mm
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1126 |
Stomach
|
PAXgene |
1
|
6 pieces, ~7.5x3mm. Mucosa up to 700microns thick, ~20-25% of thickness. Superficial 10% mucosa badly autolyzed; deeper is excellent.
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1226 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, ~7x2.5mm. Mucosa reasonably well-preserved, ~25-30% of thickness
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1326 |
Urinary bladder
|
PAXgene |
1
|
6 pieces, ~9x2mm. Urothelium better preserved than usual, ~3-4% of thickness
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1426 |
Prostate
|
PAXgene |
2
|
2 aliquots, ~10x6mm. Glands with moderate-marked mucosal autolysis. Glandular and stromal hyperplasia
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1526 |
Skin, leg
|
PAXgene |
0
|
6 pieces ~9x4mm. Squamous epithelium is ~1% of thickness.
|
Acceptable
|
|
GTEX-RUSQ
|
51-60
|
Male
|
GTEX-RUSQ-1626 |
Adipose tissue
|
PAXgene |
0
|
2 aliquots, ~13x10mm
|
Acceptable
|
|