GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-2526 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fat with 10% fibrous content; no mammary (ductal) tissue
|
Acceptable
|
 |
GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-2626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; 5% dermal fat
|
Acceptable
|
 |
GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-2726 |
Testis
|
PAXgene |
2
|
2 pieces; extensively hyalinized, minimal spermatogenesis
|
Acceptable
|
 |
GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-2826 |
Prostate
|
PAXgene |
2
|
2 pieces; glands autolyzed (3), stroma intact (1)
|
Acceptable
|
 |
GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-2926 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
 |
GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-3026 |
Brain - cortex
|
PAXgene |
2
|
4pieces
|
Acceptable
|
 |
GTEX-17F97
|
51-60
|
Male
|
GTEX-17F97-3126 |
Pituitary gland
|
PAXgene |
2
|
1 piece; anterior lobe; patchy interstitial fibrosis
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~20% fascia, rep delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~15% interstitial fat/vascular elements, rep. delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, adherent fat, ~0.5mm, delineated. SQuamous eipthelium is ~50-60 microns
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces. trace adherent fat, good specimnes
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, trace rim of fibrous tissue
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0726 |
Atrial appendage
|
PAXgene |
0
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0926 |
Heart
|
PAXgene |
1
|
2 pieces cardiac muscle (heart), switched with -1025
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target gastroesophageal junction muscularis, switched with -0925
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, minimal atherosis. ~2.5mm nubbin of adherent fat, delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1326 |
Omentum
|
PAXgene |
1
|
2 pieces 15% fascia/vascular elements, rep delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces, ~50% adherent/insterstitial fat, delineated. Islets well preserved, rep encircled
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1526 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, no target lympohid aggregates, not worth GTEX analysis. Contaminant pancreatic tisue present, ensquared
|
Unacceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1626 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1726 |
Prostate
|
PAXgene |
1
|
2 pieces, all seminal vesicle, not GTEx target
|
Unacceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa up to ~0.25mm, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.15mm, ~2-5% thickness
|
Acceptable
|
 |