GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2126 |
Prostate
|
PAXgene |
1
|
2 pieces; 1 piece is all stroma, 2nd is 80% stroma with some glands with sloughing epithelium, focal skeletal muscle
|
Acceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2226 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa with only focal lymphoid tissue and portion of muscularis (not target)
|
Unacceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; full thickness, mucosa is autolyzed with focal hemorrhage, muscularis is better preserved
|
Unacceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, some residual submucosa and lymphoid aggregates
|
Acceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness, mucosa is largely autolyzed
|
Acceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2626 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is reduced/absent
|
Acceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2726 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; mild to moderate autolysis
|
Acceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2826 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; questionable increase in glial cells
|
Acceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2926 |
Pituitary gland
|
PAXgene |
2
|
1 piece; adenohypophysis (70%) and neurohypophysis (30%)
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is ~35-40 microns
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, !0% tendinous insertion (delineated)/interstitial fat
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~40 microns
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5-10% fascia, rep delineated
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, minimal atherosis; prominent Monckeberg sclerosis (rep delineated). Rim of adherent fibrous tissue up to ~1mm
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0726 |
Lung
|
PAXgene |
1
|
2 pieces, mild congestion
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, microndular goitre, degenerative/regressive changes
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0926 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosis up to ~0.3mm
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-1026 |
Heart
|
PAXgene |
1
|
2 pieces, mild interstitial fibrosis/chronic ischemic changes
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-1126 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 70% calcifying occlusive atherosis, rep delineated
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-1326 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderate saponification, Islets (rep delineated) badly degraded
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-1426 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-1526 |
Liver
|
PAXgene |
1
|
2 pieces, mild macrovesicular steatosis, passive chronic congestion
|
Acceptable
|
|
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-1626 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5% vascular/fascia elements, rep. delineated
|
Acceptable
|
|