GTEX-1QP2A
|
51-60
|
Male
|
GTEX-1QP2A-2426 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 have abundant lymphoid deposits
|
Acceptable
|
 |
GTEX-1QP66
|
51-60
|
Male
|
GTEX-1QP66-0826 |
Ileum
|
PAXgene |
1
|
6 pieces; fibrovascular and adipose tissue, muscularis and nerves; target lymphoid aggregates not present
|
Unacceptable
|
 |
GTEX-1QP67
|
41-50
|
Female
|
GTEX-1QP67-1226 |
Ileum
|
PAXgene |
1
|
6 pieces, colon, not terminal ileum
|
Unacceptable
|
 |
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2726 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and <5% residual lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0726 |
Ileum
|
PAXgene |
1
|
4 pieces; only 1 piece has lymphoid nodules; LCM
|
Unacceptable
|
 |
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-2626 |
Ileum
|
PAXgene |
1
|
6 pieces; lymphoid-rich mucosa on all pieces comprise 80% of area; glands partially sloughed
|
Acceptable
|
 |
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-1226 |
Ileum
|
PAXgene |
1
|
5 pieces, target lymphoid aggregates well preserved, ~10-20% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-2626 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa largely sloughed, <5% target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1R7EU
|
61-70
|
Male
|
GTEX-1R7EU-1326 |
Ileum
|
PAXgene |
2
|
6 piece; moderately autolyzed mucosa; residual target lymphoid aggregates are over 25% of tissue
|
Acceptable
|
 |
GTEX-1R7EV
|
41-50
|
Male
|
GTEX-1R7EV-1226 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately to severely autolyzed mucosa and 3 of 6 pieces contain preserved lymphoid aggregates (outlined)
|
Acceptable
|
 |
GTEX-1R9JW
|
21-40
|
Female
|
GTEX-1R9JW-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates are ~10% tissue, borderline, rep delineated
|
Acceptable
|
 |
GTEX-1R9K4
|
61-70
|
Male
|
GTEX-1R9K4-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, preserved muscularis and residual target lymphoid aggregates
|
Acceptable
|
 |
GTEX-1R9K5
|
51-60
|
Male
|
GTEX-1R9K5-2026 |
Ileum
|
PAXgene |
2
|
4 pieces. target lymphoid aggregates are ~40% of tissue
|
Acceptable
|
 |
GTEX-1R9PM
|
21-40
|
Male
|
GTEX-1R9PM-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates up to ~25% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1R9PN
|
41-50
|
Female
|
GTEX-1R9PN-1326 |
Ileum
|
PAXgene |
2
|
6 pieces; colonic mucosa and wall
|
Unacceptable
|
 |
GTEX-1R9PO
|
61-70
|
Female
|
GTEX-1R9PO-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; severely autolyzed mucosa and less than 10% residual target lymphoid aggregates; preserved muscularis
|
Unacceptable
|
 |
GTEX-1RAZA
|
21-40
|
Male
|
GTEX-1RAZA-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; moderate to severe autolysis of mucosa and preserved muscularis; abundant residual mucosal lymphoid aggregates (outlined)
|
Acceptable
|
 |
GTEX-1RAZQ
|
21-40
|
Male
|
GTEX-1RAZQ-2226 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates ~40% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1RAZR
|
41-50
|
Male
|
GTEX-1RAZR-1826 |
Ileum
|
PAXgene |
1
|
5 pieces; abundant lymphoid nodules in 4 pieces [circled]; well dissected
|
Acceptable
|
 |
GTEX-1RAZS
|
51-60
|
Male
|
GTEX-1RAZS-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and residual target lymphoid aggregates (~30% of tissue)
|
Acceptable
|
 |
GTEX-1RB15
|
61-70
|
Male
|
GTEX-1RB15-1426 |
Ileum
|
PAXgene |
1
|
6 pieces, not ileum, sections of colon and muscularis
|
Unacceptable
|
 |
GTEX-1RDX4
|
51-60
|
Female
|
GTEX-1RDX4-2026 |
Ileum
|
PAXgene |
2
|
6 pieces; several lymphoid nodules [circled], but large amounts [80%] of extraneous mucosa & submucosa; LCM
|
Unacceptable
|
 |
GTEX-1RMOY
|
51-60
|
Male
|
GTEX-1RMOY-1526 |
Ileum
|
PAXgene |
2
|
6 pieces; target lymphoid aggregates not present; moderately autolyzed mucosa, submucosa and preserved muscularis
|
Unacceptable
|
 |
GTEX-1RNSC
|
61-70
|
Male
|
GTEX-1RNSC-2126 |
Ileum
|
PAXgene |
3
|
6 pieces, largely sloughed mucosa, bare trace residual target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1RNTQ
|
21-40
|
Female
|
GTEX-1RNTQ-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately autolyzed mucosa; 3 pieces with target lymphoid aggregates representing ~ 15% tissue(outlined) and non-target muscularis present
|
Unacceptable
|
 |