GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-2926 |
Coronary artery
|
PAXgene |
1
|
2 aliquots, 1 3.5mm d, one is fat and minute vessel, unacceptable for use
|
Unacceptable
|
 |
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-3026 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces, ~6x6mm
|
Acceptable
|
 |
GTEX-RN5K
|
51-60
|
Female
|
GTEX-RN5K-3126 |
Brain - cortex
|
PAXgene |
1
|
4 pieces, ~6x4mm
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, ~6.5x2mm. Squamous epithelium is ~2% of thickness
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0226 |
Adipose tissue
|
PAXgene |
1
|
2 aliquots, ~10x8mm
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 aliquots, ~10x5mm, minimal interstitial fat
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 aliquots, LDACC caution: each with ~1mm rim of fat
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0526 |
Artery - tibial
|
PAXgene |
0
|
2 aliquots, 2.5mm d. Good clean specimens
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0626 |
Thyroid gland
|
PAXgene |
1
|
2 aliquots, ~8x6mm. Patchy regressive changes
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0726 |
Coronary artery
|
PAXgene |
1
|
2 aliquots, 2.5x1mm. LDACC ALERT both have ~4x2mm adherent nubbins of fat on one edge
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0826 |
Heart
|
PAXgene |
1
|
2 aliquots, ~8x6mm
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-0926 |
Aorta
|
PAXgene |
1
|
6 pieces, ~9x1.5
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces ~7x1mm. Squamous mucosa, well preserved, is ~40-50% of thickness
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces ~7x3mm
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1226 |
Lung
|
PAXgene |
2
|
2 aliquots, ~ 7.5x7.5mm, badly autolyzed, moderate congestion
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1326 |
Spleen
|
PAXgene |
3
|
2 aliquots, 7x7mm. Badly congested/autolyzed
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1426 |
Adrenal glands
|
PAXgene |
2
|
2 aliquots, ~15x8mm. ~30% adherment/interstital fat
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, ~7x2.5mm. Tubules badly autolyzed. Patchy interstitial inflammation, abundant crystaloid deposits in tubular lumina ? origin
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1626 |
Kidney - cortex
|
PAXgene |
2
|
2 aliquots, ~8.5x8mm. All cortex, may be used when re-labled as cortex. Tubules autolyzed, crystalloid deposits in tubular lumina
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1726 |
Pancreas
|
PAXgene |
2
|
2 aliquots, ~8x8mm. ~40% adherent + interstitial fat, moderate-marked autolysis & saponification
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1826 |
Liver
|
PAXgene |
1
|
2 aliquots, ~8x6mm, moderate congestion
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-1926 |
Stomach
|
PAXgene |
2
|
6 pieces, ~8x2.5mm. Mucosal glands badly autolyzed; mucosa is ~25-30% of thickenss
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, ~7x1.5. Mucosal glands badly autolyzed, ~15-20% of thickness
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 aliquots, ~9x8mm. Gynecomastoid hyperplasia in mammary ductal uniits, background gynecomastoid change
|
Acceptable
|
 |
GTEX-RN64
|
51-60
|
Male
|
GTEX-RN64-2226 |
Prostate
|
PAXgene |
3
|
2 aliquots, ~10x7mm. Glands with near-total autolysis, patchy hyperplasia based on pattern, patchy chronic prostatitis
|
Acceptable
|
 |