GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1226 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponification overall; Islets still visible (rep delineated) but moderately degenerating
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1326 |
Lung
|
PAXgene |
1
|
2 pieces, minimal congestion
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~60% target muscularis (rep delineated); rest is adherent sersoal fat/connective tissue elements, focal mucosa
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1726 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular hyperplastic pattern
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1926 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, >95% glandular elements; excellent specimen
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-2026 |
Testis
|
PAXgene |
1
|
2 pieces, dense hyaline tissue, trace seminiferous tubules/Leydig cells, suspect fibrotic process, insufficient target tissue
|
Unacceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-2126 |
Stomach
|
PAXgene |
1
|
6 pieces, approaches score "2" in pfoci; mucosa up to ~0.7mm, ~25-30% thickness
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements only
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.4mm, glandular mucosa with advanced autolysis/sloughing
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0126 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; up to 0.5mm thick external fat on both
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0226 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; extensive calcified atheromatous plaques centrally with thin rim of relatively normal wall at the periphery
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 10% fibrovascular content
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0426 |
Skin, leg
|
PAXgene |
0
|
6 pieces; 5-10% dermal fat; well trimmed
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; striations preserved; 5-10% internal fibrovascular content
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0626 |
Aorta
|
PAXgene |
0
|
6 pieces; minimal plaque; well trimmed adventitia
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0726 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; High (60%) peripheral fibrofatty content on 1, and 10% peripheral fibrous content on other
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0826 |
Heart
|
PAXgene |
1
|
2 pieces; small foci of muscle drop-out & fibrosis consistent with past ischemia (circled); patchy hypereosinophilia consistent with recent ischemia
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-0926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 1 with 70% fat, other with 80% fibrofatty content;
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; moderate interstitial fibrosis; tubules severely autolyzed, glomeruli in relatively good shape
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1126 |
Lung
|
PAXgene |
1
|
2 pieces; severe alveolar edema; focal interstitial fibrosis
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1226 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; nodular hyperplasia with prominent amounts of colloid
|
Acceptable
|
|
GTEX-1HUB1
|
61-70
|
Male
|
GTEX-1HUB1-1326 |
Liver
|
PAXgene |
1
|
2 pieces; expanded portal spaces with lymphocytic increase, fibrous bridging and piecemeal necrosis consistent with low grade chronic hepatitis
|
Acceptable
|
|