GTEX-1M5QR
|
41-50
|
Male
|
GTEX-1M5QR-2226 |
Ileum
|
PAXgene |
1
|
6 pieces; most include significant lymphoid component, some autolyzed mucosa
|
Acceptable
|
|
GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0726 |
Ileum
|
PAXgene |
1
|
6 pieces, well-defined lymphoid aggregates delineated, ~20% of tissue
|
Acceptable
|
|
GTEX-1MCC2
|
21-40
|
Female
|
GTEX-1MCC2-1526 |
Ileum
|
PAXgene |
2
|
4 pieces; mildly to moderately autolyzed mucosa with three small lymphoid aggregates (outlined) representing less than 10% of tissue
|
Unacceptable
|
|
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; lymphoid tissue occupies 30% of specimens, the remainder consists of submucosa; mucosa is sloughed
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; preserved with excellent lymphoid component, pigmentation and reactive follicles
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2326 |
Ileum
|
PAXgene |
1
|
4 pieces, ~5-10% target lymphoid aggregates, rep delineated
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 full thickness colon, 3 muscularis only
|
Unacceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-2726 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa but residual target lymphoid aggregates represent at least 30% of tissue
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-0826 |
Ileum
|
PAXgene |
1
|
6 pieces; good lymphoid nodules on several pieces; all with muscularis; LCM
|
Unacceptable
|
|
GTEX-1MUQO
|
61-70
|
Male
|
GTEX-1MUQO-2426 |
Ileum
|
PAXgene |
1
|
6 pieces, ~40% target lymphoid aggregates, rep delineated
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, no target lymphoid aggregates present
|
Unacceptable
|
|
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and too few lymphoid aggregates (outlined) to warrant analysis(<5%)
|
Unacceptable
|
|
GTEX-1N2EE
|
61-70
|
Male
|
GTEX-1N2EE-2826 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis; target lymphoid aggregates are ~40% of tissue
|
Acceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1826 |
Ileum
|
PAXgene |
2
|
5 pieces; mucosa autolyzed; dispersed lymphoid tissue; muscularis present in 4 pieces
|
Unacceptable
|
|
GTEX-1N5O9
|
61-70
|
Male
|
GTEX-1N5O9-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and no residual target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1N7R6
|
21-40
|
Female
|
GTEX-1N7R6-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa; ~ 15% tissue is residual target lymphoid aggregates, all include muscularis (not target)
|
Unacceptable
|
|
GTEX-1NHNU
|
51-60
|
Male
|
GTEX-1NHNU-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; partially autolyzed mucosa with abundant lymphoid tissue; LCM
|
Acceptable
|
|
GTEX-1NSGN
|
51-60
|
Male
|
GTEX-1NSGN-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately to severely autolyzed mucosa and abundant lymphoid tissue
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; 3 pieces mostly muscularis, not target; moderate to severe autolysis of mucosa; residual lymphoid aggregates (outlined) are ~ 10 % of tissue
|
Unacceptable
|
|
GTEX-1NV5F
|
61-70
|
Female
|
GTEX-1NV5F-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; insufficient lymphoid tissue
|
Unacceptable
|
|
GTEX-1NV8Z
|
61-70
|
Male
|
GTEX-1NV8Z-2626 |
Ileum
|
PAXgene |
3
|
6 pieces, ~50% fat, <5% target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1O97I
|
61-70
|
Male
|
GTEX-1O97I-2526 |
Ileum
|
PAXgene |
2
|
6 pieces; several foci of lymphoid tissue; large amount of muscularis propria. LCM
|
Unacceptable
|
|
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis in target mucosa; no target lymphid aggregates
|
Unacceptable
|
|
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; well preserved ileal mucosa & submucosa, but only 2 pieces have lymphoid nodules & these are small; LCM
|
Unacceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; target abundant mucosal lymphoid tissue; non-target muscularis present
|
Acceptable
|
|