GTEX-14PJ2
|
51-60
|
Male
|
GTEX-14PJ2-2226 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed glandular epithelium and a few remnants of lymphoid nodules (outlined) LCM
|
Unacceptable
|
|
GTEX-14PJ2
|
51-60
|
Male
|
GTEX-14PJ2-2526 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; completely autolyzed mucosa and preserved muscularis
|
Acceptable
|
|
GTEX-14PJM
|
51-60
|
Female
|
GTEX-14PJM-2026 |
Spleen
|
PAXgene |
3
|
2 pieces; severe congestion
|
Acceptable
|
|
GTEX-14PJM
|
51-60
|
Female
|
GTEX-14PJM-2526 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa and insufficient lymphoid tissue
|
Unacceptable
|
|
GTEX-14PJM
|
51-60
|
Female
|
GTEX-14PJM-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa, muscle intact
|
Acceptable
|
|
GTEX-14PJN
|
21-40
|
Male
|
GTEX-14PJN-1026 |
Colon, sigmoid
|
PAXgene |
3
|
5 pieces, not target sigmoid, mucosa with autolysis
|
Unacceptable
|
|
GTEX-14PJO
|
61-70
|
Male
|
GTEX-14PJO-2126 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; scattered sclerosed glomeruli; severe tubular autolysis
|
Acceptable
|
|
GTEX-14PJO
|
61-70
|
Male
|
GTEX-14PJO-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, muscle intact
|
Acceptable
|
|
GTEX-14PJO
|
61-70
|
Male
|
GTEX-14PJO-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; too little lymphoid tissue
|
Unacceptable
|
|
GTEX-14PJO
|
61-70
|
Male
|
GTEX-14PJO-2726 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, muscle intact
|
Acceptable
|
|
GTEX-14PN4
|
51-60
|
Male
|
GTEX-14PN4-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa (3) and muscularis (2)
|
Unacceptable
|
|
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-1226 |
Thyroid gland
|
PAXgene |
3
|
2 pieces; multinodular with some fibrosis, one piece includes portion of fat/fibrous tissue
|
Acceptable
|
|
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces; marked autolysis
|
Unacceptable
|
|
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-1826 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; variable fragments including autolyzed mucosa and portion of muscularis
|
Unacceptable
|
|
GTEX-14PQA
|
51-60
|
Female
|
GTEX-14PQA-2126 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; predominantly cortex, tubules autolyzed, cannot distinguish from acute tubular necrosis
|
Acceptable
|
|
GTEX-15CHQ
|
61-70
|
Male
|
GTEX-15CHQ-1426 |
Pancreas
|
PAXgene |
3
|
2 pieces; largely autolyzed 50%; internal fat
|
Acceptable
|
|
GTEX-15CHQ
|
61-70
|
Male
|
GTEX-15CHQ-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa largely autolyzed; muscle in somewhat better shape
|
Acceptable
|
|
GTEX-15CHQ
|
61-70
|
Male
|
GTEX-15CHQ-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; 1 very small lymphoid nodule [outlined]; mucosa autolyzed
|
Unacceptable
|
|
GTEX-15CHQ
|
61-70
|
Male
|
GTEX-15CHQ-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa largely autolyzed; muscle in somewhat better shape
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-1726 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present, patchy interstitial chronic nephritis, tubules with advanced autolysis.
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.25mm but moderate-advanced autoysis
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-2026 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa autolyzed but residual target lymphoid aggregates are ~20% of tissue
|
Acceptable
|
|
GTEX-15CHS
|
51-60
|
Male
|
GTEX-15CHS-2226 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~1mm, modeate adavance autolysis
|
Acceptable
|
|
GTEX-15D1Q
|
41-50
|
Male
|
GTEX-15D1Q-1726 |
Spleen
|
PAXgene |
3
|
2 pieces, moderate-marked congestion
|
Acceptable
|
|
GTEX-15D1Q
|
41-50
|
Male
|
GTEX-15D1Q-1826 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, squamous mucosa competely sloughed; residual submucosal mucus glands present, rep delineated
|
Acceptable
|
|